KEGG   Podarcis muralis (common wall lizard): 114602013
Entry
114602013         CDS       T06059                                 
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
pmua  Podarcis muralis (common wall lizard)
Pathway
pmua03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114602013 (EDC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmua03019]
    114602013 (EDC4)
Messenger RNA biogenesis [BR:pmua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     114602013 (EDC4)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     114602013 (EDC4)
SSDB
Motif
Pfam: Ge1_WD40 EDC4_C WD40 ApoLp-III Uteroglobin NBCH_WD40 DUF2383 CowN
Other DBs
NCBI-GeneID: 114602013
NCBI-ProteinID: XP_028595555
Position
8:complement(47463781..47493897)
AA seq 1400 aa
MASASIDIEDATQHLRDILKLDRPSGSVNENQRSSTSYNGDLNGLLVPDPIASGDGASLT
KPVPQAVPLGALQEKQVICLSGDDSSTCMVITAKDVEIVASSDSSITSKARGSNKVKIQP
VARYDWEQKYYYGNLIAVSNAYLAYAIRGASNGSAMVRVLSVSTAERTLLKGFTGGVADL
AFAHLNSNQLACLDEAGNLFVWRLAMENGKIQEEILVNIKRPDGTPLNSSRRIIWCPFIP
DENEESCEEGSQTLALLHEDRAEVWDLDIIRANHNSWPVEVTSIKEGFIVVKGHSTRLSE
GALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDP
EVPFWRFLITGAEQNRELKMWCTVSWTCLQTVRFSPDIFSSMSVLPSLKACLDLSAEYLI
LSDVQRKVLYVMELVQNQEEGKAYFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEE
ETDGLSAEGTQGTGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDTAAPIPPHGSHE
DFAFPDHLADLGAEGLGSEKGSVHGSQPDLRRISELSVPVDFLSPSNDTKPKLMTPDAFM
TPSTSLQQVTVSPGSSISSLTAVTTMSTSSISDPSIPRPAEEVSLSPKMQLDSSLTLSGS
SGSLQTSPRSHSVLLPGLPDKLTPKAPIPVSPGNAPLVLERQEVEPLVVPQSSPTRERSP
DVISSASTAMSQDIPEIASETLQRSFGGGPPGLPAEMLDSNHHADSMASAASALHLLSPR
NRHSSEHSHHSLDMAPNEVDMLTAPSLLEAALPQENVASDAGVSQPWPAAPDITRETRNS
MADSPRNEVEEKHKSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFSAKAAAQ
RLPVKDWKAKVSPRASPKLKRKGKKDDGDVQQSPRAFDQQVAPEYQDELLSLLRTQQREI
VELRQNQMELMQRLTDHLDAVQSSLMGHIERVVDSQQEQEQRRLDQALAEGQQRSGQLQE
HLSQQLSQSLSTAACNRLERTIREEMKKTVPPCVSKTLDPITGQLNNTIATKLTAIEGTL
KENVTKLVKSKNLTDAIARAAADALQGPMQSAYREAFQSVVLPAFEKSCQSMFQQINDTF
KQGTQEYIQQLETHMKSKKAREQDARDSVVSQLRQLVNNFQSTTDQLAATITASMHSEVQ
HQLHVIVGNMQESILAQVQRVIKGEVSMAMKEQQAAVTSSIMQAMRSAAGTPIPATHLDF
QSQQAHVLQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPQQVFGQHPCPLSQPVLLSL
IQQLSSDLGARTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQAEPHNTL
SKPARRLMIMLQGLVTPSMS
NT seq 4203 nt   +upstreamnt  +downstreamnt
atggcctccgcgagcatcgatatcgaggacgcgactcagcatctccgagacatcctcaag
ctggatcggccgagcggttcagtcaacgaaaaccagagatcatccacttcatacaatgga
gacctgaatggtttgctggtgccagatcccatagcatctggagatggagcttccctgacg
aagccagtaccccaagcagttcctctgggagcacttcaggagaagcaagtcatctgcctc
tctggagatgatagctctacctgtatggtgataactgctaaagatgttgagatagtagcc
agcagcgactctagcatcaccagtaaagctagagggagcaacaaggtaaaaatccagcca
gtggccaggtatgactgggagcagaaatattactatggtaacctgattgctgtgtcaaat
gcctacctggcatatgccattagaggtgccagcaatggctctgcaatggttcgggtcctg
agcgttagcacggcagagcgaaccctgctgaagggcttcacaggtggagtggcagacctg
gcttttgctcacctcaactccaaccagctcgcttgcctggatgaagctggcaacctcttt
gtctggcgcctggccatggagaatggaaaaatccaagaggagatcctggtaaacatcaag
cgacctgatgggactcctctgaacagctcccggaggatcatatggtgtcccttcatccca
gatgagaacgaggagagctgtgaggaaggcagtcagaccctggcactcttacatgaggat
agggcagaggtttgggaccttgatataatccgagccaatcataattcatggccagtggaa
gtgaccagcatcaaagagggctttattgtggtaaaaggtcacagcacgcgtctgagtgag
ggagccctttctccagatggaactgtcttggccaccgcaagccatgatggctttgtcaaa
ttctggcagatttacatagaagggcaggatgaaccaaggtgcctgcatgaatggaagcct
catgatggtagacctctctcctgcttgctgttctgtgacaaccataaaaaacaagatcca
gaagttcccttctggaggtttctcatcacaggagcagaacagaatcgagagctgaagatg
tggtgcactgtatcatggacctgcctacagactgtccgattttctccggatatattcagc
tccatgagtgtccttcctagtttgaaggcctgcctggatctctcagctgaatacctgatt
ttgagtgatgtgcagagaaaggtcttgtatgtgatggaacttgtgcagaaccaggaggag
ggcaaagcttatttcagctccatctcagagtttctgctgacccatccagtcctgagtttt
ggcatccaggtggtcagccgctgccggctgagacatacagaggtcctgccagcggaagag
gagactgatggccttagtgcagaaggcactcaaggtactggagcggtagaatcagcagcg
ggggtgcttatcaaactcttttgtgtccacaccaaggcccttcaggatgtgcagatcaga
ttccagcctctccatagtccagacacagctgctccaattcctccccatggctcccatgag
gattttgcattcccagatcaccttgctgacctgggcgcagaagggcttggatcagagaag
ggatccgtgcatggctcacagcctgacttgcgccgcatttcagagctatctgttcccgtg
gatttcctctccccttccaatgacacaaaacccaagctcatgactccagatgcattcatg
actcccagcacatctctgcagcaggtcacggtgtcacctggaagcagcattagttccctc
acagctgtcacaaccatgagcacttcttccatcagtgacccctccattcccaggccagct
gaagaagtgtctctgagcccaaagatgcagctggatagtagccttaccctaagcggcagc
agtggaagtctgcagacaagccctcgaagtcattcggtcctcctccctggccttcctgac
aaactgaccccaaaggcccccatcccggtttccccagggaatgcacctcttgtgctagag
cggcaggaagtggagcctctggtggtgccccagtcttcgcctactcgtgagcgctcccca
gacgtcatttcctctgcctctaccgccatgtctcaggacatcccagagattgcctctgag
accctgcagcgcagctttggaggcggcccccctgggctccccgcagagatgctggattcc
aaccatcacgcggacagtatggcttccgcagcatcagccttgcacttgctctccccgcgg
aatcgtcacagctcggagcacagccatcactccttggacatggcccccaatgaagtggac
atgctgactgcgccttcgctgctggaggcagccttacctcaggaaaacgtggcttctgac
gctggcgtgagccaaccgtggccagctgcccctgacatcaccagggagaccaggaacagc
atggcggacagccccaggaatgaagtggaagaaaaacacaagagctcctaccacaggcac
agctaccacctcctgcagcatgacagccaggatgccagcgctgaacaaagtgaccatgat
gatgaagttgcaagcttggcttctacgtctggtggatttagtgccaaagcagctgcacag
cgcctgcctgtgaaggactggaaagccaaagtgtcgcctcgagcatctccaaagctaaag
aggaaggggaagaaagatgatggggatgtgcaacagtccccaagagcctttgatcagcag
gtcgctcctgagtaccaggatgagctgttgtctcttctgaggacccagcagagggagatt
gttgaactgagacagaaccagatggaactcatgcagaggctcaccgaccacctggatgct
gtgcagagctccctcatgggccacattgagcgagtggtggattcccagcaagagcaggag
cagcggaggctggaccaggccttagctgagggacagcagcgcagtgggcaactgcaggag
catctgtcccagcagctttcccagtccctctccacggctgcctgcaaccggctggaaagg
accatccgcgaggagatgaaaaagacggtgcccccgtgcgtttccaagactttggatccc
atcactgggcagctgaataacaccattgccaccaagcttacagccattgaggggacactg
aaggagaacgtcaccaaactggtgaaatcaaagaaccttacagatgccattgcccgggcg
gctgccgatgccttgcagggccccatgcagtcggcatacagggaggcgttccagagtgtg
gtgcttcctgcttttgagaagagctgtcaatcaatgttccagcagatcaatgacaccttc
aagcaaggcacacaagaatatattcagcagctggagacccacatgaagagtaagaaagcg
cgagagcaggatgcccgggactctgtggtgagccagctccggcagctggtcaacaacttc
cagagcacaactgatcagctggcagccaccattacggccagcatgcactccgaggtgcag
catcagcttcacgtcatcgtgggcaacatgcaggagtccatcctggcccaagtccagcgg
gtgatcaaaggggaggtgagcatggccatgaaggagcagcaggctgctgtcacctccagc
atcatgcaggccatgcgctctgctgcaggcactccaatccctgccactcacctcgacttc
cagtcccagcaggctcacgtgttacagctgttgcagcaggggcacctgaatcaagccttc
cagcaggctctcactgcagcagatttgaacctagtcctctacgtctgtgagacagttgac
cctcagcaagtgtttgggcagcatccttgccccctgtcccagcctgtcctcttgtctctc
attcagcagctctcctcagatttgggagctcggacagaactgaaactgaattacctggag
gaggcagtgatgcatctagaccacagcgaccccatcacccgcgaccacatgggctctgtg
atgaaccaagtgcggcagaagctcttccagttcctgcaggcagagcctcacaacaccctg
agcaagccggcccgccgactcatgatcatgcttcaaggcctggtcacacccagcatgtcc
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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