KEGG   Podarcis muralis (common wall lizard): 114603101
Entry
114603101         CDS       T06059                                 
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
  KO
K15172  transcription elongation factor SPT5
Organism
pmua  Podarcis muralis (common wall lizard)
Pathway
pmua03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pmua00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    114603101 (SUPT5H)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmua03021]
    114603101 (SUPT5H)
   03019 Messenger RNA biogenesis [BR:pmua03019]
    114603101 (SUPT5H)
Transcription machinery [BR:pmua03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     114603101 (SUPT5H)
  RNA polymerase I system
     114603101 (SUPT5H)
Messenger RNA biogenesis [BR:pmua03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     114603101 (SUPT5H)
SSDB
Motif
Pfam: KOW Spt5-NGN Spt5_N DUF3912 DUF150_C Ribonuc_P_40
Other DBs
NCBI-GeneID: 114603101
NCBI-ProteinID: XP_028597679
Position
8:complement(2019370..2053731)
AA seq 1082 aa
MSDSEDSNFSEDESERSSEAEEVEENEAEEERVSVVGSEKEEVEEEEEEEEEEYDEEEEE
DDDDRPAKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEFEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAQSSVRETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRMGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NQISLKMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVNRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTIG
GFQPMSPRINSPMHPSAGGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGMVK
DATESTARVELHSTCQTISVDRQRLTTFGSRKPGGMTSTYARTPMYGSQTPMYGSGSRTP
MYGSQTPSHDGNRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEEFDYGFDDEPT
PSPQGYGGTPNPQTPGYPDPSSPQVNPPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPS
PSPQSFHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGVPSPGAYNP
HTPGSGIEQSSSDWVTTDIQVKVRDTYLDSQVVGQTGVIRSVTGGMCSVYLKDSEKVVSI
SSEHLEPVIPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLEEQLKILNLRFLGKLL
EA
NT seq 3249 nt   +upstreamnt  +downstreamnt
atgtctgacagcgaggacagcaacttctctgaagatgagagcgagcgcagcagtgaggca
gaagaagtggaggagaacgaggctgaagaggagcgtgtcagtgtcgtaggcagcgagaag
gaagaagtggaggaagaggaagaagaggaggaggaagagtatgacgaagaggaggaagag
gacgatgatgaccggcctgcgaagaaacccagacatggcggatttattttagatgaagct
gatgtggatgatgagtatgaggacgaagaccagtgggaggatggtgcagaggacatcctg
gagaaagaggaatttgaagcgtccaacatcgacaatgtggttctggacgaggatcgctct
ggagcacggaggctgcaaaacttgtggagggaccaaagagaggaggagctgggcgagtat
tacatgaagaagtatgcccagtcttcggtgcgcgagacggtgtacggcggctccgacgag
ctttctgacgacatcacgcagcaacagctacttcctggagtcaaggatcccaacctctgg
actgtgaaatgcaagattggagaggagcgggccacagccattgcgctcatgaggaagttc
atcgcctaccagttcacagatacacccttgcagatcaaatcggtggtcgcccccgagcac
gtgaaagggtacatctacgtggaggcctacaagcagacgcacgtcaagcaggccatcgaa
ggggtgggcaacctccggatgggttactggaaccagcagatggtgcccatcaaggagatg
acggacgtgcttaaggtggtgaaggaggtgaccaacctgaagcccaagtcgtgggtgcgc
ctcaagaggggcatctacaaggacgacatcgctcaggtggattacgtggagcccagccag
aatcagatttccctgaagatgattccccgcatcgatttcgaccgcatcaaagcccgcatg
agcctgaaagactggtttgccaaacggaagaagttcaagcgcccgccgcagcgactcttt
gatgccgaaaagatccggtctttggggggcgacgtggcctccgatggggatttcctcatc
tttgaggggaaccgctacagcaggaagggcttcctcttcaagagctttgctatgtctgcc
gtgatcacagaaggagtgaagcccaccctgtctgagctggagaaatttgaagaccaaccg
gaaggcattgacttggaggtggtgacagaaagcacagggaaggagcgggagcacaacttc
cagcccggcgacaacgtggaggtgtgtgagggggagttgatcaacctgcaaggcaagatc
ctgagcgtggacgggaacaagatcaccatcatgccgaagcacgaagacctcaaggacatg
ctagaattcccggcccaggagttgcgcaaatacttcaaaatgggggaccacgtgaaggtg
attgccggccgctttgagggcgacacgggactgattgtccgtgtggaggagaacttcgta
atccttttctccgacctcacaatgcatgagctcaaagtcctcccccgagaccttcagctc
tgctcggagacagcctctggcgtggatgttggcggccagcacgagtggggggagctggtg
cagctggacccccagacagtgggggtcattgtccgcctggagcgggagaccttccaggtc
ctcaacatgtatggcaaagtggtgacagtcaggcaccaggctgtgaaccggaagaaggac
aaccgctttgccgtggcgctggactctgagcagaacaacatccacgtcaaagacatcgtg
aaagtcatcgacgggccccattcgggtcgcgagggcgagatccgccacctcttcagaagc
ttcgctttcctgcattgcaagaagctggtggaaaacgggggcatgtttgtgtgcaagacg
cgccatttggttctggccggaggctcaaagccccgggatgtcacaaacttcaccattggc
ggcttccagcccatgagtcctcgcatcaacagtcccatgcatcccagcgccggagggcag
cgcggcggctttggaggaggcgggatgagccgaggccgcgggcgcagagataacgacctc
attgggcagaccgtgcggatttcccaaggcccctacaaaggctacattggcatggtcaag
gatgccacggaatccaccgcccgcgtggagctacattctacctgccagaccatctctgtg
gaccgacagcgtctcacgaccttcggttcaaggaaaccaggtggcatgacctccacttat
gcacggacacccatgtacggttctcagacccccatgtatgggtcagggtcccgcacaccg
atgtatgggtcacagactccgtcgcatgatggaaaccggactcctcactacggctctcag
acccccttgcacgacggcagccggacccccgcgcagagtggggcttgggaccccaacaac
cccaacactccctccagggcggatgaagagttcgactatggttttgacgacgagcccacc
ccttctccacaaggctacggaggaacccccaacccacagactcctggctatcccgaccct
tcttccccgcaggttaacccgccgtacaaccctcagacgcctgggaccccagctatgtat
aacacagaccagttttctccctacgccgttccatccccacagggctcctaccagccgagt
ccaagcccgcagagtttccatcaagtggcgcctagcccagtcggctaccaaaacacccac
tctccggccagctaccacccaacaccgtctcccatggcttaccaggctagtcccagccct
agcccagtgggctacagccctatgactccaggggttccctctccaggagcttacaacccc
cacacaccaggttccgggatcgagcagagctccagcgactgggtcaccaccgacatccag
gtcaaagtacgtgacacctacttggacagccaggtcgtggggcagaccggagtcatccgc
agcgtgaccggtgggatgtgctcagtctaccttaaggacagcgagaaggtagtcagcatt
tcgagcgagcacctggagcctgtgataccaaccaagaacaataaggtcaaggtcatcctg
ggagaggaccgagaggccaccggtgtcctgttgagcattgacggggaggatggcatcgtc
cgcatggacttggaagaacagctcaagattctcaacctccgcttccttggcaagctgctg
gaggcctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system