KEGG   Podarcis muralis (common wall lizard): 114606238
Entry
114606238         CDS       T06059                                 
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
  KO
K15214  TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
pmua  Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:pmua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmua03021]
    114606238 (TAF1C)
Transcription machinery [BR:pmua03021]
 Eukaryotic type
  RNA polymerase I system
   Basal transcription factors
    SL1/TIF-1B
     114606238 (TAF1C)
SSDB
Motif
Pfam: TAF1C_beta-prop TAF1C_HB TAF1C_C
Other DBs
NCBI-GeneID: 114606238
NCBI-ProteinID: XP_028604054
Position
11:complement(418446..432579)
AA seq 961 aa
MAAAAAGAFPRALFPGYFQAGPPSRRRSASRASPLVAGWGCYGQVMPDPAAPGQDPPRFV
PRRLPKAVRERWTPSEAAPLPLTPPNAGCRVPPMTPQDILLQGLMLRSSEATNTGAQAAL
GFPDQLGAFFVDYPDVAFGTMGQLLQDNFHLGDVPVQEEQQQVLLCVLRLSPQPCQRKKR
RNVCRVSHLLKHIDAPDAVSCSFFGGKSIMRLCRDWLFEMPLELMADWLHEDLAEQWRRL
SFDETPTGGALAWLPREGSGGPSSRGCLVHPSGEAMNQLYFQDVALKPTTSGSLRPRTRG
RPAQFELNGRVQQVAAAQVDGIDFVGVRSDYHCGAWKMKPGGAPVLLQVVGTETPCSSIA
VSPHLPGELSFCTQGGALYAWNVETGLQRLQQDSETLFFRDPSPWRWSEFTAHPRVLSFA
DRTGLVGIDQRVSSQHRMELFKVGGEADCQRGERVVLSKYLGQAEPYQHLVATQFSVYVL
DERFPLVPALSWEHMMQRPPIYGLLSPAVAPQRSHKLLLGSHHDQELLLLQYTGGADTPC
QLWGPPRKVPSILESLPHFPVQVPIRQEALRQRLALPTAGIAAALGQQGQSQTLLVFQLS
EAGDLFYQPLLHQQEEEEEGAFEGPQPAPEAPQQEEEEDAPRGPDEAARPCEGSPLPPAT
PPAPLAPPVAAPSAYQRWIRAFQKAWKRLPEAAQGRARLPAILSQSRLFTRRELREPAGD
QAPSYGEARQRLRQAMREKRAVCPRQPAGRAPSPPGLEQEGPPGELGQRLAASWAGGWAD
WWQEKLGATKAQKQRALREQRRRRKRARGTPSLSGSFTSTTSCQSDASDSSWWAASSQTP
SEAPTDSESLHSLASATLKAPCLAPESRVSVPCSPTASQGPPPDSQGSPSSSQLLSSQTL
STRGIPKERRHTLRHYLAIFDEPDEPPAELPASQASSRGSQRPLPSSQGSQGPRKRPRMG
F
NT seq 2886 nt   +upstreamnt  +downstreamnt
atggcggcggcggcggcgggcgccttcccgcgcgccctcttcccgggctacttccaggcg
gggccgcccagccgccggcgcagcgcctcccgggccagcccgctggtggccggatggggc
tgctacgggcaggtgatgcccgaccccgcggcgcccgggcaggacccgccacgcttcgtc
ccccgccgcctcccgaaggccgtcagggagagatggacgcccagcgaagccgccccgctg
cccctgacgccgcccaacgccggctgcagggtgccccccatgactccccaagacatcctt
ctgcagggactgatgctgcgctcctcggaagccaccaacactggcgctcaggctgccctg
ggcttcccagatcagctgggcgccttctttgtggactatcctgacgtggcctttggcacc
atggggcagctcctccaggacaacttccacctgggagatgtgccagtccaggaggagcag
cagcaagttctgctgtgcgtcctcagactctccccacagccctgccagaggaaaaagcgg
cgcaacgtctgccgggtgagccacctgctgaagcacatcgatgcccctgatgccgtgagc
tgcagcttctttgggggcaagagcatcatgcgcctgtgccgggactggctctttgagatg
cccctggagctgatggccgactggctgcacgaggacctggcggagcagtggaggcgcctt
tccttcgacgagaccccaaccgggggggccttggcctggctgcccagagagggcagcggg
gggccgtcgtccaggggctgcctggtgcacccctccggggaggccatgaaccagctctac
ttccaagacgtggctctgaagcccaccaccagcggctccctgaggcctcgaacccgcggc
cgccctgcccagtttgagctcaacggccgggtccagcaggtggcagccgcccaggtggac
ggcattgactttgttggggtgcgctcagattaccactgcggcgcatggaagatgaagccg
ggaggagcccccgtcctgctccaggtggttggcacagagaccccctgctcctccatcgca
gtcagcccccacctgcccggcgagctctccttctgcacccagggaggggccctctatgcc
tggaatgtggagacagggctgcagcggctgcagcaggacagcgagaccctcttcttccgg
gacccttccccttggcgatggagcgagtttactgctcacccacgggtgctcagctttgcc
gaccgtaccggcctggtggggattgaccagagggtgtcctctcaacatcgcatggagctc
ttcaaggtggggggcgaggcagactgccagcggggggagcgcgtggtcctctccaagtac
ctgggccaggctgagccctaccagcacctcgttgccacgcagttctcggtctacgtgctg
gacgaacgcttccccctggtgcccgccctcagctgggagcacatgatgcagcggccaccc
atctacggcctcctcagcccggccgtcgctccgcagcgcagccacaagctcctcctcggc
tcccaccacgaccaagaactcttgctgctgcagtacacaggcggcgccgacaccccttgc
cagctctggggccccccacggaaggtcccttccatcctcgagagcctgccccacttccct
gtgcaagtgcccatccggcaggaggctctgcgccagcgtctcgccctgcccactgcaggc
atcgcagccgcccttggccagcagggccagagtcagaccctgctggtcttccagctctct
gaggccggcgatctcttctaccagcccttgctccaccagcaggaggaggaagaagaagga
gccttcgaggggccacagccggcccccgaagccccgcagcaggaggaagaggaagatgcc
ccccgaggccctgacgaagcagctagaccctgcgaaggctcccctctgccacctgccacg
cccccagcaccccttgccccccctgtggctgccccctccgcttaccagcgctggatcagg
gccttccagaaggcctggaagcgtctccccgaggcagcccagggccgggcgcggctgccg
gccatcctcagccagagccgcctcttcactcgccgggagctgcgggagccggccggggat
caggccccctcctacggggaggcccggcagcgcctgcgccaggccatgcgggagaagcgg
gccgtgtgcccccggcagccggctggcagggccccctcgcccccggggctggagcaggag
ggccccccgggggagctgggccagcgcctggccgcctcctgggcgggcggctgggccgac
tggtggcaggagaagctgggcgccaccaaggcgcagaagcagcgggcgctgagggagcag
cggcggaggcgcaagagggcaaggggaacccccagcctctcagggagcttcacctccacc
accagctgccagtcggacgccagcgactcctcctggtgggcagccagcagccagaccccc
agcgaggcccccaccgactcagaaagcctccactctctggcctctgccaccctgaaagcc
ccctgcctggcacccgagtctcgcgtctccgttccctgctccccgactgcttcccagggc
cccccgcccgactcccagggctccccctcgtcctcgcagctgctctcgtcccagaccctc
tccacccgcgggatccccaaggagcgccgccacaccctccgccactacctggccatcttt
gacgagcccgacgagcccccggccgagctgccagccagccaggcctccagccgcgggagc
cagcgccccctcccctcttcccagggctcccagggaccccgcaagagaccccgcatgggc
ttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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