KEGG   Prunus mume (Japanese apricot): 103319511
Entry
103319511         CDS       T03196                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
  KO
K11855  ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pmum01002]
    103319511
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmum04121]
    103319511
Enzymes [BR:pmum01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     103319511
Peptidases and inhibitors [BR:pmum01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   103319511
Ubiquitin system [BR:pmum04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    103319511
SSDB
Motif
Pfam: UCH UCH_1 zf-MYND
Other DBs
NCBI-GeneID: 103319511
NCBI-ProteinID: XP_008219286
Position
LG2:complement(4977117..4984850)
AA seq 1109 aa
MHVVVDLGFRSLVLVACFLVPVIGFFVVRRKWRLAKARTEEIKRLLILAKEEAARAEFEV
AAGYAAVSVAENKGSYCAVCYCPTTTRCARCKAVRYCSGKCQIIHWRQGHKEECHPPSHQ
SIDREGDAGLNVAKKDLEINTDKIENRQSVERFSEEPALPNPGCSPEVQCITDDDSEDEF
LSERKGTNSTSESSATSFSGFSTSASCTGSSDDASVSESVSSCESDRPDGHPSANDSLDM
LHTSFNVDNIEQSKPLSPKFASLVDSVNGFAKLGKLSQAKPSCNDGENKRRSNCSSDLNK
SSRSEGPVTESCTPSSGFWGRTLDSVGSSSDVQVSDSSVASNSKVPGFGSSLQFSFNLSG
NTAPALHMLGSGSSGTILGDARTDCSELNKSIYGADLSEKISGDAPKVRNSPSRNCKGSN
NEVNGSSSDLHALKSRAVNSTPSSSPSVHKSIRTERVSKVTDALNSSRMLPTSLERSNHA
VNNCGRTSNLSKSREVGCPPSVSDARLASAVESSSLPCVKAGKVDFVEARDAVSSQVTNS
SNDRNGLKTSVFKVFDQFRGSKISKHYPLGVGTEIAGKHIEKELFSYELFVKIYNWNKVE
LRPSGLINCGNSCYANAVLQCLAFTPPLTAYLLQGLHSKVCVNKEWCFMCEFESLVSKAK
EGKSPLSPMAILSQLRNIGSQLGNGREEDAHEFLRYAIDMMQSVCLMEAGINASRSLKEE
TTLIGLTFGGYLRSKIECSKCQGKSERQERMMDLTVEIEGDIGTLEEALRRFTSTETLDG
ENKYQCSRCKSYEKAKKKLTILEAPNILTIALKRFQSGKFGKINKPIRFPEILDLAPYMS
GTSDKSPIYRLYGVVVHLDIMNAAFSGHYVCYVKNSHNKWFKIDDSTVTAVELENVLTKG
AYMLLYSRCLPRAPRLIRNRIISPDPRHRAIPSWISGKTTNLKPKSVSPHSSVDPFLPSS
NPPEDTTSSQLKRILEEDSSSDNSSLISNNSDEGSCSTDSTRDSSSADDLSDYIFGNSGR
GWSSPWRNFSDSDTSSSSSSSPSSTKHSPLSDSNRYASDGAMTLPFLHSDTSKHCRKLAS
SSSSRNRETDSERLGPDSLRDVKFKKSSR
NT seq 3330 nt   +upstreamnt  +downstreamnt
atgcatgtggttgtggatctagggtttcggagcctcgtgctggtggcttgttttttggtg
ccggtgatcggcttcttcgtggtccgaaggaaatggcgcctcgcgaaggccagaacggag
gagatcaagaggcttttgatcttggccaaggaggaagctgctagagctgagtttgaggtc
gcggctgggtacgccgccgtttcggtagctgagaataaaggttcttattgcgctgtttgt
tactgccccaccaccacgcgctgcgcccgctgcaaggcggttcggtactgttctgggaag
tgtcaaattattcactggcgacaaggtcacaaggaagaatgccatcctcctagtcatcaa
agtattgacagggaaggtgatgctggcctgaacgtggccaagaaagaccttgaaattaat
actgacaagattgaaaacaggcagtcagttgaaagattctccgaggaacctgcattgcct
aatcccggttgctctccagaagttcaatgtataacagatgatgatagtgaagatgaattt
ctttccgagaggaaaggaacaaattctacttcagaatcatcagctacctctttttctgga
ttttctacttctgccagctgtactggatcttcggatgatgcttctgtcagtgagagtgtt
agttcatgtgaatctgacagaccagatgggcatccatctgcaaatgattcccttgacatg
ctacacacttcctttaatgttgacaacattgaacaatctaagccattatctccaaaattt
gctagcttggttgattctgttaatggttttgctaaattaggtaagttaagtcaggctaaa
cctagttgcaatgatggagagaacaagcggagatcaaattgttcttcagatttgaacaaa
agtagcaggagtgagggtccagttaccgagtcttgtacaccatcttctggtttctggggg
agaactctcgattctgtagggtccagtagtgatgtccaggtgtccgattccagtgtagcc
agtaatagcaaggtacctggttttgggtcttccttacagttttctttcaacttgtctgga
aatactgctcctgccttgcatatgcttggctctgggtcaagtggcactatactaggggat
gctcgtacagattgttcagagctcaacaagtcaatttatggagctgatttatcagagaag
atcagtggagatgctcctaaggtcaggaactccccatcccggaactgtaaagggtcgaat
aatgaggttaatggatctagcagtgatttacatgccttgaagtccagagcagttaattct
acaccatcctcctcgccttctgttcataaatctattcgcactgaaagagtttcaaaagtt
acagatgctttgaattctagtagaatgctacccacaagcttggaacggtccaaccatgct
gttaataactgtggcagaacttcaaatctttcaaagtctagggaagttggatgtccaccc
agtgtttctgatgctcgtcttgcatctgctgttgaaagttcttcacttccatgtgtaaaa
gctggaaaagttgattttgttgaggctagggatgctgtttcatctcaagttacaaattct
tcaaatgataggaatggcttgaaaacgtctgtgtttaaagtttttgatcagtttagagga
tctaaaatatcaaagcactatcctttgggagttgggactgagattgcaggaaaacatatt
gagaaggaacttttttcatatgaattatttgtcaagatttacaattggaacaaggtggaa
ttgcgcccttctggccttataaattgtggtaacagctgttatgccaatgcggtgctccag
tgcttggcattcactccacctctgactgcttatttgcttcaaggactccattctaaagtt
tgtgtaaataaggaatggtgtttcatgtgtgagtttgaaagtctagtttcgaaggcaaag
gaaggaaaatcccctctgtctcctatggcaatactttcccagttaagaaatattggaagt
caacttggtaatgggagagaagaagatgcccatgaatttctaaggtatgctattgatatg
atgcaatctgtttgtcttatggaagcggggattaatgcatcgcgctctttgaaagaagaa
acaactctaattggccttacatttggaggctaccttcgatcaaagatagaatgctcaaag
tgccaaggaaagtctgagcggcaggaaagaatgatggatcttactgttgagattgagggt
gatataggaaccttggaagaggctcttcgacggttcaccagtactgagaccttggatggg
gagaacaaataccaatgtagcagatgcaaatcgtatgagaaggccaaaaagaagttgaca
atactggaagctcccaatatccttaccattgcactgaagcgttttcagtcgggaaaattt
gggaagatcaataagcctattcggtttcctgagatcctggacttggcaccttatatgagt
ggtacaagtgataaatctccaatatatagactctacggggtggttgttcacttggatatc
atgaatgccgcattttctggtcactatgtgtgctacgttaagaactcccacaacaagtgg
tttaagatcgatgacagcacggtaacagctgttgaacttgaaaacgtcttgacgaaaggg
gcatacatgcttctttattcgaggtgtttgccaagggccccaagattgataagaaacaga
ataatatctcctgatcccagacatagagccattccttcctggattagtggaaagactacc
aatttgaaaccaaaatccgtctcaccgcattctagcgttgacccattcttacccagttca
aatcctccagaggatacaacgagttctcagctgaaaaggattttagaagaggactcatca
agtgacaattcttcccttatcagcaacaactctgacgaaggttcttgtagtactgatagc
actcgtgattcttctagcgccgatgacttgtccgattatatatttggtaattcaggacgt
ggttggagtagcccttggaggaatttttcggattctgacacttcttcctcatcctcttcc
tcaccctcaagtacgaagcattcaccactctctgattcaaaccggtacgcttcagatggt
gcaatgactcttccttttttgcattctgacaccagtaaacattgtagaaagttagcaagt
agtagtagtagtagaaatagggaaactgactcggagagattaggacccgactctttaagg
gatgtaaaatttaaaaaatcaagtagataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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