KEGG T03196: 103319899

Prunus mume (Japanese apricot): 103319899

Entry

103319899         CDS       T03196

Name

(RefSeq) ribosomal RNA small subunit methyltransferase B

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

pmum Prunus mume (Japanese apricot)

Brite

KEGG Orthology (KO) [BR:pmum00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmum03009]
    103319899
Enzymes [BR:pmum01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     103319899
Ribosome biogenesis [BR:pmum03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    103319899

SSDB

Motif

Pfam:

Methyltr_RsmB-F NusB FtsJ Met_10 Methyltransf_31 Methyltransf_15 Methyltransf_25 GCD14 Ubie_methyltran MTS

Other DBs

NCBI-GeneID:

103319899

NCBI-ProteinID:

XP_008219717

Position

LG1:2928611..2934986

AA seq 525 aa
MAHVLSLRVLLSAETNRSSISSKSLKLDKRTKTSISAPRKGNLNPSHKTQKVNLEISPHR
AVSAVRLMRIEMGGAFADLLNEQGKGSGANEMGYVGRTLGFRTRDLEDRDLRLVTDIVGG
TIRWKRYLDHLISSLCHDANTFTRMEPLLLQILRIGFYEIIKLDMPPYAVVDENVRLAKV
ALRHGAGNMVNAILRKLVLHMENSSLPLPKLEGDDRTQARALATLHSHPVWMVRRWTKHL
GQEEAIRLMMWNNSDPSFSLRANSGKGVSRADLVTKLDVLKVPHEPSFYLNDFVRMKTGL
QMVIQAGLLKEGLCSVQDESAGLVVSVVDPQQGESIVDCCAAPGGKTLYMASLLSGQGMV
HAVDINEGRLRILKETAKLHQVDGVITTIHADIRTFSDNNTMKCDKVLLDAPCSGLGVLS
KRADLRWNRKLEDMEQLKNLQDELLDAASLLVKPGGVLVYSTCSIDPEENEERIVAFLLR
HPDFCIDPIGRYVPPDFVTEHGFYFSNPVKHFLDGAFAARLSRAI

NT seq 1578 nt +upstreamnt +downstreamnt
atggcacacgtgctttctctccgtgtgcttctctctgcggagaccaacagaagttctatt
tcttctaagtccctgaaattggataagagaacgaagacatccatttctgctcctaggaaa
ggtaatttgaatccctcacacaaaacccagaaggtgaatttggagatttctcctcacaga
gctgtttctgcagtgagattgatgagaatagagatgggaggtgcttttgctgatcttctc
aatgagcaaggcaagggttctggtgcaaatgagatgggatatgtaggaagaactcttggg
tttcgcacacgggatttagaggatcgtgatcttagattggtcactgatattgttggaggt
acaatccgctggaagagatatcttgatcatttgattagttcactttgtcatgatgcaaac
acatttaccaggatggaaccacttcttttgcagattctccggattggtttctatgagatt
attaagctggatatgccaccatatgctgttgtagatgagaatgtgaggcttgcaaaagtt
gcccttagacatggtgctggcaacatggtcaatgcaattctccggaagcttgttcttcat
atggaaaatagctctcttcctctacccaaattggagggtgatgatcgcacacaagcacgt
gctcttgccactctgcactctcatccagtttggatggtaaggcggtggacaaagcatctt
ggacaagaagaagcaattagattaatgatgtggaataacagtgatcctagtttcagctta
agggcaaacagtgggaaaggtgtttcaagagctgaccttgtgacgaagcttgatgtgtta
aaggttccgcacgagccctctttttatttgaatgattttgtccgtatgaaaacagggttg
cagatggtcatacaagctggtctattgaaagaaggtttatgctcagttcaggatgagagt
gcaggtctggtagtttctgttgtagatcctcaacagggtgaaagcattgttgattgttgt
gctgctcctggaggaaagactctttacatggcatcacttttgagtggccaaggtatggta
catgcagttgacataaatgaaggccggttgagaatcctcaaagagacggctaagttgcac
caagtagatggtgtcatcaccactatccatgcagatatccgtactttttctgacaataat
acaatgaagtgtgataaagttctgttggatgctccatgctctggattgggtgttctctct
aagagagcagacttgcgttggaacaggaaattagaggatatggagcagcttaagaatttg
caggatgagctccttgatgcagcttccctattggtcaagcctggtggagttttagtatac
agtacctgctctatagatccagaagagaatgaagagaggatagttgcatttcttctcagg
catccagatttttgcatagatcctattggcagatatgttccacctgattttgtaaccgag
catggtttctatttctccaaccctgtaaagcatttccttgatggggcatttgctgctcgt
ttaagccgagctatataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

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