KEGG   Prunus mume (Japanese apricot): 103320540
Entry
103320540         CDS       T03196                                 
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 9, chloroplastic isoform X1
  KO
K03798  cell division protease FtsH [EC:3.4.24.-]
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pmum01002]
    103320540
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:pmum03110]
    103320540
Peptidases and inhibitors [BR:pmum01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   103320540
Chaperones and folding catalysts [BR:pmum03110]
 Other chaperones and cochaperones
  AAA proteases
   103320540
SSDB
Motif
Pfam: AAA Peptidase_M41 AAA_lid_3 FtsH_ext AAA_16 AAA_5 AAA_22 RuvB_N TIP49 AAA_14 AAA_2 AAA_17 nSTAND3 DUF815 AAA_33 Mg_chelatase
Other DBs
NCBI-GeneID: 103320540
NCBI-ProteinID: XP_008220458
Position
LG1:3300343..3312743
AA seq 835 aa
MSSVEYLRPTIHSRFCLNSNSNAYHCRHGLGFVRGQAKVFNPEARRVVSNTAASKSVALY
GQGRAVRVSERFSLWKSHGGFRTVRVSASGQDNDSGEKSEAKASEGQGVNNNKPNSSSPA
PNRRRESQKKANWWWSKGGKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPLPGSEP
RTPTTFISVPYSDFLSKINSNQVQKVEVDGVHVMFKLKSEQGEQESEVSGGVSKFQDSEA
LIRSVAPTKRVVYTTTRPSDIKAPYEKMLENEVEFGSPDKRTGGFLNSAMIALFYVAVLA
GLLHRFPVSFSQHTAGQIRNRKSGGSGSAKASEQGETITFADVAGVDEAKEELEEIVEFL
RNPDKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGAS
RVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFDSNSA
VIVLGATNRSDVLDPALRRPGRFDRVVMVETPDRTGREAILKVHVSKKELPLAKDVYLGD
IASMTTGFTGADLANLVNEAALLAGRQSKVVVEKIDFIQAVERSIAGIEKKTAKLRGSEK
AVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRSGGALGFTYTPPTSEDRYLLFIDEL
RGRLATLLGGRAAEEFVYSGRVSTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIATLSA
GGMDESGGGAPWGRDQGHLVDLVQGEVKALLQSALDVALSVVRANPSVLEGLGAHLEEKE
KVEGEELQEWLKLVVAPTELAIFISGKQEYLISGKQESLISGKQESLLPLQTGSG
NT seq 2508 nt   +upstreamnt  +downstreamnt
atgtcgtcggtagagtatttacgtccaacaatccacagtaggttctgcttaaattcgaat
tctaatgcttatcactgccgccatggattgggcttcgttcgtggtcaagctaaggttttc
aacccggaagcgagacgggttgtttcgaatacggcggcgtccaagtcagtcgctttgtac
ggacagggcagagctgtgagagtttcggagaggttcagtctctggaagagccatggaggg
ttcaggacggttagggtttcggcgagtggtcaggacaacgattcaggagagaagagcgag
gcgaaggcgagcgagggccaaggggtgaacaacaacaagcccaattcgagctcgccggct
ccgaatcggcgcagagagagccaaaagaaagcgaattggtggtggtccaaaggagggaaa
tggcggtggcagcccatagttcaagcccaagagattggaatcttgctcttgcaattgggt
attgtgattttcgttatgcggttgcttagacctggaattccattaccagggtcggagccg
aggactccgacaacgtttattagcgtgccgtacagtgattttttgagtaagattaatagt
aaccaggtgcagaaggttgaggttgatggggttcatgttatgttcaagttgaagtctgag
cagggtgagcaagaaagtgaagtcagtggtggggttagtaagtttcaagattcggaggct
ttgataagaagtgtggctccgacgaagagggtggtttacacgacgacgaggccaagtgat
ataaaggcgccgtatgagaagatgcttgagaatgaggtggagttcgggtcgcccgataag
cggacaggtggatttttgaactccgcaatgatagctttgttttacgttgctgtgcttgca
gggcttctgcaccggttccctgtaagcttttctcagcacacagctggtcagattaggaac
cgaaaatctggaggctctggcagtgctaaagcatctgaacaaggggaaacaataaccttt
gctgatgttgctggtgttgatgaggctaaagaggagctagaagaaattgtggaatttctt
cggaatccagacaagtatgtacgacttggtgctcgtcctccacgaggagttctcttggtg
ggtcttcctgggacaggcaagactcttcttgccaaggctgtggctggggaagctgaagtg
ccctttataagttgctctgctagtgagttcgtagagttgtatgttggcatgggtgcctct
cgcgtaagggatctatttgcacgggcaaaaaaggaggcaccgtcaataatattcattgat
gagatagatgctgtagcaaaaagtcgggatggaaaattccgtattgtcagcaatgatgag
cgagaacaaaccttgaatcagttgctcactgagatggatgggtttgacagcaattctgcg
gttattgtccttggagcaactaatcgctcagatgtcttagacccagcacttcgtcgacca
gggagatttgatcgtgtggttatggtggaaacaccagataggacaggaagagaagcgatt
ctaaaagtgcatgtttccaaaaaggaactccctttggcaaaagatgtttaccttggtgac
attgcttctatgactactggctttactggggcagatcttgcaaatttggtgaatgaagct
gctttattggccggaagacaaagcaaggtggttgtggaaaaaattgatttcattcaagct
gtggagagatcaatagctggcatagaaaagaagactgccaagttgcggggaagtgagaag
gctgtagttgcacggcatgaagctggtcatgcagtagtagggactgccgttgcaagtctt
cttcctggacagccacgtgttgagaaattgagcatattgccacggtcaggaggggcattg
ggctttacttatactcctccgacaagcgaagatagatatttactgttcattgatgagtta
cgtggacgtttggctacgcttctcggaggacgcgcagcagaagaatttgtatattcaggt
cgtgtatcaacaggtgcacttgatgatatacgacgagcgactgacatggcatacaaagca
gtagctgagtatggtctcaatcaaacaattggacctgtgtctatagcaacactatctgct
ggtggaatggatgagtcggggggaggtgctccttggggaagggatcaggggcatcttgtt
gatcttgttcaaggagaggttaaagcattgctacaatctgctttggatgtagccctatct
gtcgtgcgtgctaatcctagtgttttggagggtctcggtgctcatctggaagaaaaagag
aaagtagaaggtgaagagctacaagagtggctaaaattggtagttgcaccaactgaattg
gcaatcttcattagtggcaagcaagagtatctcattagtggcaagcaagagtctctcatt
agtggcaagcaagagtctcttcttccattgcagaccggctctggttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (16)   
   Pfam (16)   
All databases (32)   

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