KEGG   Prunus mume (Japanese apricot): 103322047
Entry
103322047         CDS       T03196                                 
Name
(RefSeq) nuclear pore complex protein NUP54
  KO
K14308  nuclear pore complex protein Nup54
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103322047
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmum03019]
    103322047
Messenger RNA biogenesis [BR:pmum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103322047
SSDB
Motif
Pfam: Nup54
Other DBs
NCBI-GeneID: 103322047
NCBI-ProteinID: XP_008222132
Position
LG2:complement(20613109..20616368)
AA seq 393 aa
MFGAQASSSPFGLSSSTSVFGTPSSTPAFGTPSSTPAFGTPSSTPSFFTPSTPAFGTPSS
SSFSTGGFGGSYFATPFSSQTQQQQQQQQQTPSFQQPQSAGGFGFQSPFTTPQQPTPFPN
SQLTTQMAPVAPLPFSLADRDIQAIVDAYKDEPGNPKYAFKHLLFSVTDPQFRVKPAGVS
DIMWAEAMGKLEGLESTDRERLWPQLVQGFKDLSQRLKLQDEVLLSDAERLQMTQSNVKM
LQRHFQADTLPWIERMRQKEQGLQRRLLRVMRLLEALEGKGFRLPLMKGEAELAEKLAAI
TRQLKGSGAELSRRVQNLVTISRVQENAIGAGGLVCLPGSTKIHEQSLADMQEVLQQQTE
AIARLGNVLKRDIRDMEIIMAEETETTENMIMS
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgttcggagctcaagcttcctcttctcctttcggcctgtcatcgtcaacctcagtcttc
ggaacgccgtcatcaacccctgccttcgggacgccgtcgtcaaccccggccttcgggacg
ccgtcgtcaaccccaagcttcttcactccttcgaccccagcctttggaactccgtcgtcg
tcttcattttccactggtggcttcggcggctcctacttcgccactccattctcttctcaa
actcaacagcaacaacagcaacaacagcagacgccgtcgtttcaacaacctcagtctgct
ggtggctttgggtttcagagtccgttcactacgccacaacagccgactcccttccctaat
tctcaattgactactcagatggctcctgttgctcctctccccttctctcttgccgatcgc
gatattcaagcaattgttgacgcttacaaggatgagcctggaaaccctaaatatgctttt
aagcatttgctgtttagcgtaactgatccgcagttcagggtgaagcctgctggtgtatca
gatataatgtgggcagaggctatggggaagcttgaaggtctggaaagtactgacagggaa
cgcctgtggcctcagcttgttcagggttttaaagatctttcgcaacgcttgaagctccaa
gatgaagtcctcctttcagatgctgagagattgcaaatgacccaaagcaatgtcaagatg
cttcaaaggcattttcaagctgacactcttccttggatcgaaagaatgagacaaaaagaa
caaggtcttcaaaggcgccttttgagggtgatgagactactggaggcacttgagggcaag
ggttttcggctgcctttaatgaaaggtgaggcagaattggctgagaagttagctgcaatt
actagacagttgaaaggatcgggagctgagttatctaggagggtacaaaacctggtaacg
atatcccgtgtccaagaaaatgctattggtgctggtggtttagtctgtcttccaggatca
accaaaatacatgaacagagtcttgctgatatgcaagaggtcttacaacagcagacagaa
gccattgcaagacttggcaatgttttgaagcgcgacattagggacatggagattattatg
gctgaggagacggaaacaacagagaatatgattatgagctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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