KEGG   Prunus mume (Japanese apricot): 103322906
Entry
103322906         CDS       T03196                                 
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL28 isoform X1
  KO
K12900  serine/arginine-rich splicing factor 10
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103322906
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pmum01009]
    103322906
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmum03041]
    103322906
Protein phosphatases and associated proteins [BR:pmum01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103322906
Spliceosome [BR:pmum03041]
 Common components
  Common spliceosomal components
   SR proteins
    103322906
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 103322906
NCBI-ProteinID: XP_008223083
UniProt: A0ABM0ND91
Position
LG2:30832789..30837032
AA seq 253 aa
MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSYRDRRSPAPSGLLVRNLPLD
ARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQQLNHSVIGGRE
IRIVFAEENRKTPQEMRTTTRVSSGRYGGSSRRRTPPRSPRRQYRSYSRSPSPVMHDSRD
RGARDDYRSPVQSRSVSRSPSPRDGRDYRRSPSPRENGRSPRDERDYAPSRSRSLRGNSR
SPSRSRSRSYSPR
NT seq 762 nt   +upstreamnt  +downstreamnt
atggccaggtacagaagccgaagcagaagctacagccctcgtcgacgcagccggactccg
ccacgtggacgcaagcgatacgacgacgaccctcgtgatcgctaccgtgaaagcaggtct
tacagagaccgtcgctcacccgctccttctggcctgctcgttcgaaatcttcctctcgac
gccaggccagaagatcttaggatcccatttgagcgatatggcccagtgaaggatgtgtat
cttcctaagaattactacaccggggagccacggggctttgggtttgtgaagtaccgttat
gcggaggatgcggctgaagcaaagcaacaactgaaccattcagttattggtggacgtgag
ataagaattgtgtttgctgaggagaatagaaaaactccccaagaaatgcgtacaactact
cgcgtaagcagtggtcggtatggaggaagctccagaaggagaacaccaccgaggtcccca
agacggcaatatcgttcttactcgcggtcaccgtcacctgttatgcatgactcaagggac
cgtggggctagggatgattatcgttcgccagtgcaatctagatcagtttcacgatctcct
tcaccacgtgatggaagagactacaggaggtccccaagtccgcgtgagaatggtcggagt
cctcgtgatgaaagagactatgcacccagcagatcaaggagtctgaggggtaacagtcgc
agtccatcaaggtctcgttcgcgatcctacagtcctcgctga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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