KEGG   Prunus mume (Japanese apricot): 103324624
Entry
103324624         CDS       T03196                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
  KO
K18663  activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103324624
Enzymes [BR:pmum01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     103324624
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    103324624
SSDB
Motif
Pfam: Sec63 DEAD ResIII Helicase_C AAA_19 T2SSE
Other DBs
NCBI-GeneID: 103324624
NCBI-ProteinID: XP_008224926
Position
LG3:1512994..1532958
AA seq 2089 aa
MLVQLPRLTSSLREPFDIDQAYLQRKLILQSQKPRQSSSSVDESELARKIVYRWEEASIE
VRQAYKQFIGAVVELIDGEVPSEEFREVALTVYHLFGRPEEEDNVETNIAGKKLEVQKLL
GHAVSDANVRKVASLAQRLAGMQSSDKGTTLVSEKPVNGTHDNVEFGADLVFHAPARFLV
DVSLEDGELLGEESTGISSSYYEGLYSRGNLNDHHPSTDGQSFNLSWLKDACDQIVTKSR
SQLSRDELAMAICRVLDSDKPGDEIAGVLLDLVGDSAFETVQDLVSHRKELVDAIHHGLL
GLKSDKLSSSSQSRMPSYGTQVTVQTETERQIDKLRRKEEKRQRRGTEYGTDSELAAVNF
SSLLQASERKNPVDDLLALGEGPQSLAVSALPQGTVRKHHKGYEEVIIPPTPTAQMKPGE
KLIEITELDEFAQAAFRGYKSLNRIQSRIFHTVYYTNENILVCAPTGAGKTNIAMVSILH
EIGQHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNMTVRELTGDMQLSKNEL
EETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVE
STQTMIRIVGLSATLPNYLEVAQFLRVNPEAGLFFFDSSYRPVPLAQQYIGISEQNFTAR
IELQNEICYKKVVESLRQGYQAMVFVHSRKDTAKTAQKLVELARKFEGLEYFKNDDHPQF
SLIQREVMKSRNKDLVALFEFGVGVHHAGMLRTDRGLTERLFSDGLLKVLVCTATLAWGV
NLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYY
LRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLVYGIG
WDEVVADPSLSLKQRALIADAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVE
TYNEMLRRHMNETEVIDMVAHSSEFENIVVRDEEQNELETLVRSSCPLEVKGGPSNKHGK
ISILIQLYISRGSIDTFSLVSDAAYISASLARIMRALFEICLRKGWSEMSLFMLEYCKAV
DRQVWPHQHPLRQFDRDLSAEIVRKLEERGADLDHLYEMQEKDIGALIRYSPGGRLVKQY
LGYFPWIQLSATVSPITRTVLKVDLVITPDFIWKDRFHGTAQRWWILVEDSENDHIYHSE
LFTLTKRMAKGEPQKLSFTVPIFEPHPPQYYVRAVSDSWLHAEAFYTISFQNLALPEAST
SHTELLDLKPLPVTSLGNSIYEALYRFSHFNPIQTQTFHVLYHTDNNVLLGAPTGSGKTI
SAELAMLRLFNTQPDMKVIYIAPLKAIVREXXXXXKRRLVSQLGKKMVEMTGDYTPDLMA
ILSADIIISTPEKWDGISRNWHSRAYVKKVGLMILDEIHLLGADRGPILEVIVSRMRYIS
SQTEREVRFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPR
MNSMNKPAYAAIGTHSPTKPVLIFVSSRRQTRLTALDLIQFATSDEHPRQFLSMPEEALQ
MVLYQVTDNNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPA
HLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFL
YEPFPVESSLREQLHNHINAEIVSGTICHKEDALHYLTWTYLFRRLMFNPAYYGLDNTEP
EVLSSYLSRLVQNTFEDLEDSGCIKMNEDNVEPTMLGSIASQYYLSYMTVSMFGSNIGSD
TSLEVFLHILSAASEYNELPVRHNEENYNEALSERVRYKVDKDRLDDPHVKANLLFQAHF
SQLELPISDYVTDLKSVLDQSIRIIQAMIDICANSGWISSSITCMHLLQMVMQGLWFDRD
SSLWMMPCMNVELADSLSKRGIFSVQQLLYLPKATLQTMIGNFPASKLYQDLQPFPRIEV
KLKLQQKDSGKSLSLDIRLVKTNFRQNKSRAFTPRFPKVKNEAWWLVLGNTSTGELYALK
RVSFSDHLVTHMELPSAPNTLQGMKLTLISDCYLGFEQEHSISELIQRQ
NT seq 6270 nt   +upstreamnt  +downstreamnt
atgttggttcagcttccgcgcctgaccagctctctgagagagccctttgacatcgaccag
gcctatttgcagcgcaagctcatccttcagagccagaagcctcgccagtcttcgagctca
gttgatgagtcagagcttgcacggaagatagtttatagatgggaagaagcttcgattgaa
gtgcggcaagcttacaagcagtttattggggctgtggtggagttgatagatggagaagtt
ccatccgaagagtttcgtgaggtggcactcaccgtgtaccatctttttggcaggccagag
gaggaagacaatgttgaaacaaatattgccggaaaaaagctggaagtgcaaaaactactt
ggtcacgccgtttcagatgctaacgtgcggaaagttgcctccctagcccagagacttgca
gggatgcagtccagtgataaggggactacacttgtttcagaaaagcctgtaaatgggact
catgacaatgtggaatttggtgctgaccttgttttccatgcaccagctcgatttctggtg
gatgtttctttggaggatggcgagttattgggtgaggaaagcactggaatttcttcttca
tattatgaaggattatatagtcgcggtaacttgaatgatcatcatccttctactgatgga
caaagcttcaatttgagttggttaaaagatgcatgtgatcagatagtaacaaaaagtagg
tcgcagctttctcgagatgaactggctatggccatttgtcgggtgcttgactctgataaa
cctggtgatgagatagcaggtgtcttgttagatcttgttggggatagtgcatttgaaact
gttcaagacctcgtatcacatcgaaaggaacttgttgatgccatccatcatgggttactg
ggactgaaatctgacaaattgtcttcaagctctcaatcacgtatgcctagttatggcaca
caggttactgttcaaacagaaactgaacgacagattgataaacttcggcgcaaagaggaa
aagcgacaaagacgaggaacagaatatggcactgatagtgaactggctgctgtaaatttt
tcttctttactacaagcaagcgaaagaaaaaatcctgttgatgatctcttagcgcttggt
gaagggcctcaatctttagcagtaagtgctcttcctcaaggaactgtgaggaagcatcat
aagggatatgaggaggtcattattcccccaacaccaacagcacaaatgaaacctggagaa
aagctgattgagataacggagttagatgaatttgctcaagctgcttttcgtggatataag
tctttgaaccgtattcagagccgcatatttcatactgtttattacactaatgaaaatata
ctagtttgtgctccaacaggagctggcaaaacaaacatagctatggtttctattctacat
gagattggacagcacttcaaagatggttacttgcataaagatgaatttaagatagtttat
gttgcaccaatgaaggcattagctgcagaagttacatcaacttttagccatcgcttatct
ccattgaatatgactgtgagagaacttactggagacatgcaactttctaagaatgaactt
gaagaaactcagatgatagtgacaacacctgagaaatgggatgtcattactcgcaagagc
agtgacatgtcactttcaatgttggtgaagctcctaattattgatgaagtgcatctatta
aatgatgatagaggccctgtaattgaggcactagttgctcgaactttgcgccaggtggag
tctacacagacaatgatacgcattgtgggcctttcagctactctaccgaactatttagag
gttgcacagtttctgagagtgaatccagaagcaggactcttcttctttgattctagttat
cgcccagtgcccctcgcacagcagtatattggtattagtgagcagaattttacagcccgt
attgaattgcagaatgagatatgctacaagaaggttgttgaatcactcaggcaaggttat
caggcaatggtattcgttcattctcgaaaggacacagcaaaaacagctcagaaattggtt
gaacttgctcgcaagtttgaaggactggagtattttaagaatgatgaccacccacaattt
tcgttgatccagagggaagttatgaagtccagaaacaaagatcttgttgcactttttgaa
tttggagttggagttcatcatgctgggatgttacgtactgatagagggctgactgagcgc
cttttctctgatggactgttgaaggtacttgtttgtacggcaactttggcatggggtgta
aatctaccagctcatactgttgtgataaaggggactcaattatatgatccaaaggctggc
gggtggcgagacctgggcatgctagatgttatgcagatctttggacgggctgggagacct
caattcgacaaaagtggtgaaggcattataattacatctcatgacaaactggcctactat
ttgcggttgctgacaagccaacttcctatagaaagtcagtttattagttccttgaaagac
aatttaaatgcagaggtggcacttggtactgtcaccaatgtcaaggaagcttgtgcatgg
cttggatatacgtaccttttcataagaatgaggctgaaccctttggtgtatggtattggg
tgggatgaggttgttgctgatccttccttgagtttaaagcaaagagctctcatagcagat
gctgcacgtgccctggacaaagcgaaaatgatgcgctttgatgagaaaagtggcaacttt
tattgtacagagcttggtcgaattgcaagccacttttatattcaatattcaagtgttgaa
acatacaatgaaatgttgagacgccacatgaatgagactgaggtaatagacatggtagcc
cactcttctgaatttgaaaatattgttgttcgagatgaggaacagaatgagttagagacg
ttggtgcgatcatcgtgcccattagaagttaaggggggtccttcaaataaacatggaaag
atatccattctcattcagttgtacatatctcgtggctcgattgataccttttcgttggtt
tctgatgctgcatacataagtgcaagcttggcacgcattatgcgggcattattcgagatt
tgtctacgaaaaggctggtctgagatgtcactgttcatgttggaatattgcaaggctgtg
gatcgccaagtttggccccatcagcatcctctcagacaatttgacagagatctttcagca
gaaatagtgcgaaagcttgaagaacgaggggctgacttagatcacctatatgagatgcag
gaaaaagacattggagcactgattcgctattcacctggaggaaggttggtcaagcaatat
ttgggatattttccatggatccagttgtcagcaactgtaagtccaatcaccagaactgtt
ttaaaggtggatttggttattacaccagactttatatggaaagatcgttttcatggcaca
gcccagcgttggtggattctagttgaggattctgagaatgaccacatctaccactcagag
cttttcactttgacaaagcggatggcaaaaggggaacctcagaagctttcattcactgtg
ccaatatttgagccacatccacctcagtattatgttcgtgctgtttctgattcttggttg
catgcagaggctttctacaccatatccttccagaatctagcactgccagaggctagtact
tcacacacagaattgctagatttgaagcctctccctgtgacttcacttggcaacagtatt
tatgaagcgttgtacagattttcacactttaatccaatacaaacacagactttccatgtc
ctgtatcacacagacaataatgttctattaggagctcccactggaagtgggaaaactata
tctgctgagctcgctatgcttcgcctattcaatacccaacctgatatgaaggtaatttac
atagcacctttgaaggctattgttagggaannnnnnnnnnnnnnnaaaagacgtcttgtc
tctcagctagggaaaaagatggttgaaatgaccggagattatactccagatttgatggcc
atattgtcagcggatatcataatatctacacctgagaagtgggatggtatcagtcgtaat
tggcatagtcgagcctatgttaaaaaggttgggcttatgatcttggatgagattcacttg
ttgggagctgaccggggacccatccttgaggttattgtgtcaaggatgagatacatatca
tcacagacagagcgtgaagtacggtttgtaggcctttctacagctttagcaaatgcaggg
gatttggctgattggctgggtgttggggaaatcggactcttcaatttcaaaccaagcgtg
agacctgtacctcttgaagtccatatccagggataccctggaaagttctattgcccaagg
atgaatagcatgaacaagccagcatatgctgcaataggcacccattcacctacgaaacca
gttttaatatttgtttcctctcgtcgacagacaaggcttactgcattggacctcattcag
tttgcgacatcagatgaacatccaaggcagtttcttagcatgccagaagaagccctacag
atggttctttatcaggtcactgataataacctgaggcacactttgcagtttggaattgga
ttacaccatgccggtctgaatgacaaagatagatctctggttgaggagctttttgcaaac
aacaaaattcaggtattggtttgtaccagcacattggcatggggtgtaaaccttccagct
catctggtcattattaagggaacagaatattatgatgggaaaacaaagagatatgttgat
tttccaatcacagatatcttgcaaatgatgggtcgtgctggccgcccacaatttgatcaa
catgggaaagcagtcattcttgttcatgaacccaaaaagagcttctataaaaagttttta
tatgaaccatttcccgttgagagcagtctgagggaacagttgcacaatcacatcaatgct
gagatagtttctggcacaatttgccataaagaggatgcgttgcattatcttacctggaca
tatttatttcgtagactgatgtttaatccagcttactatggcttggacaatactgaacct
gaagttctcagctcttatttgtctaggttagtgcaaaacacatttgaggatctggaagac
agtggatgcatcaagatgaatgaagacaatgtagagccaacgatgctgggttcaatagca
tcccagtattatcttagctacatgactgtatcaatgtttggttcaaacataggatcagat
acatcgcttgaagtcttcttgcatatcctatctgctgcttcggaatataacgaacttcct
gtgcggcataatgaggagaattacaatgaagcattgtctgagagagttcgatataaagtg
gataaggaccgcttagatgatccacatgtcaaagccaatctgctatttcaggcacatttc
tcgcagttagaattaccaatcagtgattacgtcacagacttgaagtcagtattggatcaa
agtatacgaatcatccaggccatgatagatatatgtgctaacagtgggtggatttcaagc
tcaattacttgcatgcatcttctgcaaatggtcatgcagggtttatggtttgatagggat
tcttccttatggatgatgccatgcatgaatgtagaacttgctgactcgctaagcaaaaga
ggaatattcagcgtacagcaactattgtatctccccaaggcaactttgcagaccatgatt
ggaaattttcctgcttcaaaattgtatcaggatctgcagccttttccacgcattgaagtg
aaattaaaacttcagcaaaaggacagcggaaagtctctctctctagacatcagactggtg
aagaccaatttcaggcaaaacaaatcaagagcatttaccccgcgtttccctaaggtgaaa
aacgaagcatggtggttggtccttgggaacacctcaacaggggaattatatgctctgaaa
agagtatctttctctgatcacttggttactcacatggagttaccatcagctcctaatact
ctccaggggatgaaattgactttaatttcagattgttatctgggcttcgagcaagagcac
tctatttcagagcttattcaacggcagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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