KEGG   Prunus mume (Japanese apricot): 103330900
Entry
103330900         CDS       T03196                                 
Name
(RefSeq) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103330900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmum03019]
    103330900
   03009 Ribosome biogenesis [BR:pmum03009]
    103330900
Messenger RNA biogenesis [BR:pmum03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     103330900
Ribosome biogenesis [BR:pmum03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    103330900
SSDB
Motif
Pfam: RNase_T Rv2179c-like XPG_I_2 DUF6604
Other DBs
NCBI-GeneID: 103330900
NCBI-ProteinID: XP_008231733
Position
LG5:complement(4827261..4834894)
AA seq 252 aa
MEDLANAFSVLELDAEDDDQAREASSVSKNKDDTTKSSGKKMEKKVNNSDNMLLVKEKES
QQNSEMPLEEYKLPLVWIDLEMTGLNVEVDRILEIACIITDGKLTKSVEGPDLVIHQTKE
CLDRMGDWCQSHHKASGLTKKVLESTVSEREAEKQVIEFVKRNVGTYTPQLAGNSVYVDF
AFLKKYMPDLANRFSHVIVDVSSVKALCIRWYPRDNKKAPSKENNHRAMDDIRESIRELK
YYKENIFKASKK
NT seq 759 nt   +upstreamnt  +downstreamnt
atggaggacctcgcaaatgcattctctgtgctggagcttgacgctgaagacgacgatcaa
gcgcgagaggcctcttctgtttccaaaaacaaagatgacactacaaaatcttcaggcaag
aagatggagaagaaagtcaacaactctgataacatgttgctagtaaaagagaaagagagt
cagcaaaattcagagatgcctctagaagagtacaagttgcccctggtatggattgacttg
gaaatgactggtttaaatgttgaagttgatcggatactagagattgcctgtataattact
gatggaaaattaacgaaatcagtagagggccctgatttggttattcatcaaactaaggag
tgtttagataggatgggagactggtgtcaaagtcatcataaagctagtgggttgacaaaa
aaggtgctcgaaagtacagtcagtgaaagagaagctgaaaagcaggtcatagaatttgta
aagagaaacgtaggaacatatacacctcagttagcaggcaattcagtttatgtggatttt
gcatttttaaagaaatacatgccagatttggctaaccgtttctcccatgtaatagtggat
gttagcagtgttaaagctttatgcattcgctggtatcctagagataataagaaagcccct
tctaaagaaaataatcacagagccatggatgatattagagaaagtatcagggaacttaaa
tactacaaggagaatatattcaaagcatctaaaaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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