KEGG   Prunus mume (Japanese apricot): 103331439
Entry
103331439         CDS       T03196                                 
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease DNA2
  KO
K10742  DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03030  DNA replication
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103331439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmum03032]
    103331439
Enzymes [BR:pmum01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     103331439
DNA replication proteins [BR:pmum03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    103331439
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     103331439
SSDB
Motif
Pfam: Dna2 AAA_12 AAA_11 AAA_30 AAA_19 UvrD-helicase Cas_Cas4 nSTAND3 ResIII SLFN-g3_helicase AAA_18 Dna2_Rift AAA_16
Other DBs
NCBI-GeneID: 103331439
NCBI-ProteinID: XP_008232282
Position
LG5:complement(11643673..11655676)
AA seq 1366 aa
MPPRKKPLSSSTTSAKKSNSKVQPQPSKFGIQHFFERHTQNSQNPKIAAVSASQQNPKPL
AAPASYTVAPAQSVPEIQNPAQIETGNAVLASGSHEIRSNLLSCSNNGMSQNTPPENLRA
VGVVGEEENMEDEASPEISKSKSFKRFKFSPGMLIKQSQDDGGDEVTWRISPVNERLQAV
SKRMPEIIRVLADSSRLKSLTINQCSQKKTSPVKAGKVEKWLPSQTLNTSERSLVSLNKV
GVKRVNPDEDMDSNGNVSNMTISGRASRQSPFRTPPSLSYCHDKLTNGVACNEGSDQPGL
RQHKKALLELLDQVEDVISVEDSVSNDVEESPFQVKDRKGDDMHVKLHQKSSYCNFLVLE
VSDCGLADSSDAHKVLRLLDEQCGEEHAVYLQDEWFYSVIAPGDTVNVIGEFDDKGQCRV
DHHHNFIIVHPDVLVAGTRVAASFSCPRRTVLDERLKDNEHSSAALSGTILHQVFQAALV
EETPTINFLEEHTRFVLQKNIENLYACGVNEKGMYKTLIEAVPRILKWVNLFKNTQNSEV
PSVDFGSDNGMKKVKLSEVIDIEEMAWAPKYGLKGMIDASVRVKVESNKNESHEMVMPLE
FKSGKIPSGQSSMEHTAQVTLYTLLMSDRYQKHIDTGLLCYLQSDQTQGVAVRRSDLVGI
IMRRNELANDVLKASRTQVLPPMLKSQSMCRGCRHLNVCTIYHKAHGGSSGSSGLGDLFD
SNTHHLTNAHAAFLRLWDWLIDLEAKEMQLVKNEIWRSHNSKSDYAAGCLSSVVLDWKLP
YSKSKKDNRFVYNFLRNGLPSLSERTSNGDFLNAASSPTKEVDCALRCGDFVILSSESSH
LPVASGIITDISHSHVSVSFSKLLRLPGSSPSSEASHLLQEIWRVDKDEFMTSFSVMRLS
LVQLFLQSAQAAHVRKMIVDLEAPRFDKGRILSQDPAISYVLSQRNLNVDQRQAILKILA
AKDYALILGMPGTGKTSTMVHAVKALLIRGASILLTSYTNSAVDNLLVKLKAQNIDFLRI
GRHEAVHEEVRGHCFSEMNIQSVEDIKLRLDQVKVVAVTCLGITSPLLANKRFDVCIMDE
AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVKSTEARENGMGVSLFCRLSEAHPQAISA
LQSQYRMCQGIMELSNALIYGDRLRCGSPEIANAKLDFSSSKSRSSWIQEVLNPTKPVIF
INTDALPAFEAKDHKIVNNPMEAHIIVQVVEELVNSGIKEEDIGVITPYNSQAEIIRLSI
NHTSVEIHTIDKYQGRDKDCILVSFVRSTENPRNCSSSLLGDWHRINVALTRAKKKLIMV
GSCKTLSKVLLMKLLIEKVDQQSGILNVSKKDIHFKRDRKRCSQAR
NT seq 4101 nt   +upstreamnt  +downstreamnt
atgcctccaagaaagaaacccctttcttcttccacgacgtctgctaagaaatccaactcg
aaagttcagcctcagccgtccaagttcggcatccagcatttcttcgagcgccacacccag
aactctcagaaccccaaaatcgccgcagtttctgcttctcagcagaaccctaaacccctc
gcagctcccgcctcttacaccgttgctccggcacaatcggttcctgagatccaaaaccct
gcacagattgagacgggtaatgcggttttagcttcgggaagtcatgagattcggtcgaat
ttgctgtcatgtagtaacaacggtatgtcgcagaatacgcctccagagaatttgagggca
gtcggagttgttggtgaggaggaaaatatggaagatgaggcctcgccggagatttcaaaa
tccaaatcttttaagcgcttcaagttctcgccaggaatgttgataaagcagagccaggat
gatggaggtgatgaggtgacatggaggatatctccggtaaatgaaagactccaagctgtt
tcaaagcgcatgccggagattattagagtactggcggactcttcaaggcttaaatcttta
accattaaccaatgctcgcaaaagaagacttctccggttaaagctggaaaggttgagaag
tggcttccttcacagacactgaatacttctgaaagatctttggtatccctgaataaggtt
ggcgtaaagagggttaacccagatgaggatatggatagtaacggaaatgtgagcaatatg
actatctctggaagagctagtaggcagagtccattccgaacaccaccttctctatcgtac
tgccatgataagcttacgaatggtgttgcatgtaatgaaggttctgatcagccagggtta
aggcagcataaaaaggcattgcttgaactgttagatcaagtggaagatgttatttctgtt
gaagattcagtatctaatgatgtggaggaatctccatttcaagttaaagatagaaaaggt
gatgatatgcatgtcaaattgcatcagaaatcttcctattgtaatttccttgtattggag
gtatctgactgtggacttgctgactcatctgatgctcataaggttcttcggttactggat
gagcaatgtggagaggagcatgctgtctatttacaggatgagtggttttacagtgtcatt
gcacctggagatactgtcaatgttattggtgaatttgatgacaaaggacagtgtcgtgtg
gatcatcaccataattttataattgttcatccagatgtgctagtggctggaactagggtt
gcagctagcttcagttgcccgaggcgaactgtcctggatgagaggctaaaggacaatgag
cattcaagtgcagcactaagtggtacaatattgcaccaagtttttcaggctgcacttgtg
gaggagacacctacaataaatttcttggaggaacacacaagatttgtgctccagaaaaac
attgagaacttgtatgcttgtggagtgaacgaaaagggcatgtacaaaacattgattgag
gctgtcccaagaatattgaaatgggttaacctattcaaaaacacccagaattcagaagtt
ccttctgttgattttggatctgacaatggaatgaaaaaggtcaaattatctgaggtaatt
gatattgaagagatggcctgggctccgaaatatggtctgaaaggcatgattgatgcttct
gtcagagtgaaagttgaatctaacaaaaatgaatctcatgagatggttatgcctttagag
ttcaaaagtgggaaaatacctagtggccagtcatccatggagcatactgcgcaagtgaca
ttgtacactcttcttatgtcggacaggtaccagaagcatattgatactggtcttctatgt
tatctccagtcagatcaaacacagggagttgcggttagaagatctgacctggttgggata
atcatgcgacgtaatgaacttgcaaatgatgtcctcaaggcatcacgaacacaagtactg
cccccgatgctaaagagtcagagcatgtgcagaggttgtcgccatctaaatgtttgtact
atctatcacaaggcacatggaggaagctcagggagcagtggattgggagacttatttgat
tcaaatacacatcacctaacaaatgctcatgctgctttcctaaggctgtgggattggttg
attgatttggaagctaaagagatgcagcttgtaaagaatgaaatatggcggtcacataat
tcgaaaagtgattatgctgcgggttgcctttcttctgttgttcttgattggaagcttcca
tattcgaagtctaaaaaagataacagattcgtatataattttctgcgtaatggtttgcct
tctctcagcgagaggacatctaacggagattttttgaatgctgcttcatctccaacaaaa
gaagtggattgcgcactaagatgtggtgactttgtgatacttagcagtgaatctagtcat
ctacctgttgcaagtgggattataacggatataagtcactcccatgtatctgtttctttc
tctaagctcttacgacttcctgggagcagtccttcttcagaggcaagtcatctccttcaa
gagatctggcgggttgacaaagatgaattcatgacatcattttcagtaatgaggttgagc
cttgttcaactttttcttcaaagtgcacaagctgctcacgtgagaaaaatgattgttgac
ttagaggctcctagatttgacaagggacgtatattgagccaggatccagcaatatcttat
gtcttgtcccagagaaatttaaatgttgatcagcggcaagccattcttaagatacttgca
gcaaaggattacgcacttatactaggaatgcctggaacaggcaagacatcaacgatggtg
catgctgtgaaagccttgttgattagaggtgcatccattttgcttacgtcctacacaaac
tctgctgttgataatctacttgtcaaattaaaggctcagaatatagattttttacgcatt
ggaagacatgaagctgtgcatgaggaagttcgagggcattgcttttcagaaatgaacata
caaagtgtggaagacattaaattaagactagaccaagtcaaggtggtagctgttacatgc
ttggggatcaccagtcccttgcttgccaataagagatttgatgtatgcatcatggatgaa
gctggacaaaccacccttccagtatctcttgggcctttgatgttcgcatcaaagtttgtt
ctggttggtgatcattatcaattacctcctctggtcaagagtacagaggctcgagaaaat
ggaatgggggtaagcttgttttgcaggctctcagaagcgcatcctcaggcaatctcagcc
ttgcaaagccagtaccgtatgtgtcaaggcattatggaactgtcaaatgccttgatatat
ggtgatagattgcgctgtggctctcctgaaatagctaatgccaaactcgacttttcaagt
tcaaagtctcgttcgtcgtggatacaggaggtgttaaatccaaccaaaccagttatattt
attaatacagatgctttacctgcttttgaggcaaaggatcacaagattgtgaataacccg
atggaagctcacataattgtacaggttgtggaggaactagttaacagtggaattaaggag
gaagatattggcgtcatcaccccatataactctcaggcagagattatccggctttccatc
aatcatacctctgtggagatacataccattgacaaataccagggaagagataaggattgc
atactagtgtcttttgttaggtcaacggaaaatccaaggaattgctcttcttcactgctt
ggagactggcataggattaatgtggctcttactcgtgccaagaaaaagttaataatggtt
ggatcatgcaaaaccctatcaaaggttctgctaatgaagcttcttattgagaaagttgac
caacaatctggcatcctaaatgtatccaaaaaggatatccactttaaaagagaccgaaag
agatgctctcaggccagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (25)   

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