KEGG   Prunus mume (Japanese apricot): 103334163
Entry
103334163         CDS       T03196                                 
Name
(RefSeq) LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 18 homolog
  KO
K14553  U3 small nucleolar RNA-associated protein 18
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103334163
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmum03009]
    103334163
Ribosome biogenesis [BR:pmum03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    103334163
SSDB
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 103334163
NCBI-ProteinID: XP_008235324
Position
LG6:complement(1842600..1845484)
AA seq 552 aa
MSLISQNVPSAFKANKTKRDDVDEPSFLQGNDDNGNGKQSNLDIMKTKKRKKAHKEEDEK
VAIEQEKEMKKLENFLFGAIYSPLEFGKEDEEEVGDAVDKGSSLFFVDRSANSVLSVHEE
XPVWVDEEEEKTNINIAKVNRLRKLRKEEDESLISGSDYVSRLRAQHAKLNPGTEWAQLD
PQLRNSRYSDDESSDDENGVAVARGYKGVDAVDDLLRTNEDLVVKSSAKLLPGLLEYSVL
VHANAEEPSKGPINSVQFHRNGQLLLTAGLDRRLRFFQIDGKRNTKIESIFLDDCPVRKA
SFLPDGSQVIIAGRRNFFYSFDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTIAFVGNE
GYILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGDGHVYHWDLRTGACLHKAVD
EGCINGTSLCTSPNGALFAAGSGSGIVNIYNSEEFLGGKRKPIKTIENLTTKVDFLKFNS
DAQILAICSSMKKNSLKLIHVPSFTVFSNWPPQKKALHYPRCLDFSPGGGFMAVGNAAGK
VLLYKLHHYHHA
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgagtttaatatcacagaatgttccttcggcttttaaagccaacaagactaaaagggat
gatgttgatgagccttcatttctgcaagggaatgatgacaacggaaatggaaaacaatct
aacttagatattatgaaaacaaagaagcgaaagaaagcacacaaggaagaggatgagaaa
gtggctattgagcaagagaaggaaatgaagaagctggaaaactttttgtttggagccatt
tattccccactagagtttggaaaggaggatgaggaagaagttggagatgcagtggataaa
ggttcttctttattctttgtggaccgttcagccaatagtgtgctctcggtgcatgaagag
ngacctgtctgggtggatgaggaagaggaaaagaccaatataaatattgctaaagttaac
agattaaggaagctgaggaaggaggaggatgagagtttgatttctggttcagattatgtc
tcaagattgagggctcagcatgctaagctgaaccctgggacagaatgggctcagcttgat
ccacagttgaggaacagtagatattctgatgatgaatcatcagatgatgaaaatggggta
gcagtggcccgtggctacaagggtgtagatgctgttgatgatctccttcgaacaaatgag
gatcttgttgtgaagagcagtgcaaaattgttgcctggacttcttgaatattcggtactt
gtacatgcgaatgcagaggaaccttctaaaggaccaataaattcagtgcagtttcataga
aatgggcagttgcttcttactgctggattggatcgaaggcttaggttttttcagattgat
ggcaagcgcaatactaaaatagaaagcatctttcttgatgactgccccgttcggaaggcg
tcctttttgcctgatggctctcaggttattatagctggaaggaggaacttcttttacagc
tttgacttggtgaaggcaaaagttgataaaataggtcccttggttggtcgagaggagaaa
agcttggaagtttttgaggtttcccctgactctagtacaattgcctttgtgggaaatgaa
ggttatatcttgttggtttcgtctaaaacaaaagaattgattgggacattaaagatgaat
ggaactgttcgttctttagcttttgccgatgatgggaagcaattgttgagctctggtgga
gatggacatgtttaccactgggatctcagaacaggggcttgcctccataaggctgttgat
gaaggttgtataaatggtacatctctttgtacatctccaaatggagcattgtttgctgct
ggttcaggcagtgggattgtcaatatttacaacagtgaggagtttttgggtggcaagaga
aaacccatcaagaccattgagaatcttacgaccaaagtagattttctgaagttcaacagc
gatgctcaaatattggctatttgttcaagcatgaagaagaacagcttaaagttgatacat
gttccatcatttactgttttctcgaactggcctccgcagaagaaggcccttcactatccc
cgctgcttggattttagccctggtggaggtttcatggctgtaggaaatgctgctggaaaa
gtgttattgtacaagttgcaccattaccatcatgcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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