KEGG   Prunus mume (Japanese apricot): 103335791
Entry
103335791         CDS       T03196                                 
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
  KO
K10606  E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03460  Fanconi anemia pathway
pmum04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103335791
  09124 Replication and repair
   03460 Fanconi anemia pathway
    103335791
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmum04121]
    103335791
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103335791
Enzymes [BR:pmum01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103335791
Ubiquitin system [BR:pmum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103335791
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     103335791
SSDB
Motif
Pfam: FANCL_C FANCL_d3 FANCL_d2 SLX1_C zf-rbx1 zf-HC5HC2H_2 zf-RING-like zf-HC5HC2H zf-RING_2 Cys_rich_CPXG
Other DBs
NCBI-GeneID: 103335791
NCBI-ProteinID: XP_016651018
Position
LG1:complement(18686881..18692070)
AA seq 327 aa
MVLLLLLYFSFGGWLYLQVKIKIKRTNCLLKFPHVYECAEQRRCREMVESSTFYRAVYSE
IEEVGWEHLVRFGGDLTSLSFRILDGKGRMHIIEIQLDKTHPKWPPSISADVPYMFDLKW
STHSRLKDVVQQFKKHLEKLQAFWSTLDDIDRSLWVIDPKQASPAVSYRQINMGNDCFIM
LSINAFDPRSLPECRFIGSGPIVNLLRNRWRRNSKRWIKDKQFLENLKCLLETQLPIPPD
VQKNEQQVECGICYAQSLPIDEELRHKSGTGTDYTCDNTSCKRAFHSICLVDWLRSITTT
RQSFDVLFGSCPYCSEPVAVKIDSMKK
NT seq 984 nt   +upstreamnt  +downstreamnt
atggtacttcttcttctgctctatttctcttttggtggctggttgtatctgcaagtaaag
ataaagataaagcgcaccaactgtttgctaaaattcccccatgtttatgaatgtgctgag
cagaggagatgcagagaaatggtcgaatcgtctaccttttaccgtgcagtgtactcagag
atagaggaggttggatgggagcatctggtgaggttcggtggagatctaacatctctcagc
tttcggatcttagatggcaaggggagaatgcatattattgagattcaattggataaaacc
catcctaaatggcctccttcaatttcagcagatgtaccatatatgtttgatttaaaatgg
tcaacacactcaagattgaaagatgtggtgcagcagtttaaaaagcatctggagaagctt
caggcattttggtctactttggatgatattgacaggtccctttgggttattgatcctaaa
caagcatctcctgccgtatcctatcgccagatcaatatgggaaatgattgcttcatcatg
ttgtctattaatgcctttgatcctagatctttaccagaatgtcgttttattggttcaggt
ccaattgtgaacttgttgagaaatagatggcgaagaaatagcaaaagatggataaaagac
aaacaatttctagaaaatcttaaatgtcttttggagactcaactgccaattccccctgat
gtccagaagaatgagcagcaagttgaatgcggaatttgttatgctcagagtcttccaatt
gatgaagagctcagacataagagtggaactgggactgactatacatgcgacaataccagt
tgcaaaagggctttccatagcatatgtcttgtggactggttgcgttctatcaccacaaca
aggcagtcatttgatgttctatttggaagttgtccatactgttcagaaccagttgcagtg
aaaatcgacagcatgaagaagtag

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