KEGG   Prunus mume (Japanese apricot): 103336325
Entry
103336325         CDS       T03196                                 
Name
(RefSeq) protein FAM188A isoform X1
  KO
K22647  ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:3.4.19.12]
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmum04121]
    103336325
Enzymes [BR:pmum01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     103336325
Ubiquitin system [BR:pmum04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   MINDY
    103336325
SSDB
Motif
Pfam: MINDY-3_4_CD UIM
Other DBs
NCBI-GeneID: 103336325
NCBI-ProteinID: XP_008237590
Position
LG6:complement(18999854..19006561)
AA seq 637 aa
MADHEEEDLRTALRMSMQNSPPEPKRSKPRDGPAGAPTGLPEESSEVKTRRLQRELMATA
AEKRMLDAKKASPSPSSVSGSAGSSGSALAAKVVRKGKELSLEEVNLGKGLSEEDAKQLF
SMVFGAEVTKGILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLAAIQAFVLKYLLFCPA
ELGKVVPNMHHNMGSGTLSNSPCVASNNFASLTEDAKARALIRSMGEILFLCGSNKRAVI
ATLSVIGDDTERSKDNLDDEVSELKLVDNALFSDRNNVITKSLEGLSIESAADLHKVLRV
NTYTTRESAFKRLQAVIPVFQSRMGALLFLISALLSRGLDLVQADRDDPSLPLVTAPFGH
ASQEIVNLLLCGQAVPNVFDGKMDLGGGMSLKGVSRSVEVGFLTLLESLNFCKVGQYLKC
PKWPIWVVGSESHYTVLFSLDTTVQDENELEGRESQIRKAFDAQDQSGGGGFISVEGFHQ
VLKETNVELPTEKVDLLCSTGFIVWSEFWQVILDLDKSLGGLKDSTGLMGKKVFDLYHFN
GIAKSDLNGSQVSSGGETPVQRPRLTKLRVSVPPRWTPEEYMTDVAVSSGSGGNESGGKV
TESAKPEPSQHAPLVDCIRTRWPRAVCNWIGYPPSIV
NT seq 1914 nt   +upstreamnt  +downstreamnt
atggcggatcacgaggaggaggacctgcgaacggcactacggatgagtatgcagaattcg
cctccggagcccaagcgcagcaaacccagggacggccccgcaggagctcccaccgggttg
cctgaggagtcgtcggaagtgaagacccggagacttcagcgcgagctcatggctactgca
gccgagaagagaatgctggatgccaaaaaggcctcgccttcacctagctcggtctcgggg
tctgcgggctcctcgggttcggctttggcggcaaaggtcgtgaggaaaggtaaggaattg
agcttggaggaagtgaatttgggaaaaggtttgagcgaagaggatgcaaagcagttgttt
tcgatggtgtttggtgctgaggttacaaagggcattcttgcacagtggagtaatcagggt
ataaggtttagccctgatccagaaacatctatgggtctagtgcagcatgaaggtgggccc
tgtggcgttttagcagcaattcaagcatttgttctcaaatacctccttttctgcccagct
gaattaggtaaagttgtaccaaacatgcatcacaatatgggttcagggacactgtctaat
agtccgtgtgttgcatcgaataattttgcctctcttactgaagatgcaaaagcaagagca
ctgattagaagtatgggtgaaatattgttcttatgcggaagtaataaaagggctgtgatt
gcaactttgagtgttattggagatgacactgagaggtctaaagacaatctggatgatgaa
gtaagtgaactgaagctagtggataatgctctgttttctgataggaataatgtaataaca
aaatcacttgagggtctttcaattgaatcagctgctgatttgcataaggtgctaagagtt
aacacatacacaacacgagaaagtgcatttaaaaggcttcaagctgtgattcctgttttc
caaagtcgtatgggggcattgctgttccttatttctgctttactttctcgaggactggac
ttagttcaagctgacagggatgatccgagcctacctcttgtcactgctccttttgggcat
gcttcacaggaaattgtgaacttgctgctctgcgggcaggcagtgcccaacgttttcgat
ggaaagatggatttaggtggtggcatgtctttaaagggtgtatccagatctgtggaagtt
ggattcctcactctgttagaatccctaaatttctgtaaggttggccagtatctgaaatgc
ccaaaatggccaatatgggtagttggaagtgagtctcattatacagtccttttttccctt
gataccactgttcaagatgagaatgaactggaaggaagggaatcacagattcgaaaagct
tttgatgcacaagatcagagtggaggtggtggttttattagtgtggaaggctttcatcaa
gtccttaaagaaactaatgtagaacttccaactgagaaggttgacctcctatgcagcaca
ggatttatcgtatggagcgagttctggcaggtcattttggatttggacaagagcttagga
gggctgaaggattcaactggattgatgggtaagaaggtgtttgatctttaccattttaat
ggaattgcaaaatcagatctgaatggaagccaggtaagctctggaggcgagactccagtt
caaagacctaggctcacaaaattgagggtgtcggttcctccaagatggactcctgaagaa
tatatgacagatgtggcggtgtcctctggttctggtggtaatgaatctggagggaaagtc
acagaaagtgccaagccagagccttctcagcatgcacctctggtggactgcataagaacg
cgctggccccgtgctgtctgcaattggatagggtacccgcctagtatagtctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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