KEGG   Prunus mume (Japanese apricot): 103340300
Entry
103340300         CDS       T03196                                 
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1
  KO
K15692  E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmum04121]
    103340300
Enzymes [BR:pmum01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103340300
Ubiquitin system [BR:pmum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103340300
SSDB
Motif
Pfam: PA zf-RING_2 zf-C3HC4 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-ANAPC11 zf-RING_16 zf-RING_4 PHD Herpes_ORF11 ECSCR HTH_63 Prok-RING_4 OppC_N
Other DBs
NCBI-GeneID: 103340300
NCBI-ProteinID: XP_016651637
Position
LG8:11676720..11679905
AA seq 291 aa
MRQAFLGLCLLVFAHLVQLTSAIVVLKPFAREFSDLPAKFAIAVNSSGICGALLISDPLD
ACSSLRNGLRPNETDKTRFALIVRGECAFKDKVQNAQNAGFRGAIVYDDRDKGKLVYMMI
ESVNITIHAVFVSKASGEVLKEHALGEEGECCIFPFQNETAWTVLAISFISFLVILGILI
IAIFAPRHWLYSQGRNQLPKSVDTKIVEALPCFTFSSTSLGECHSEDTCAICLENYKDEE
ILKVLPCQHEFHSSCVDSWLTKWGTFCPVCKHDIRTKIVNPEIKRRTWLYS
NT seq 876 nt   +upstreamnt  +downstreamnt
atgaggcaagcttttctgggattatgtttgcttgtttttgctcaccttgtccaactaacc
tcagctattgtcgttctcaaaccatttgccagggagttctcggaccttcccgccaagttt
gctattgctgtcaatagctctggtatatgtggagctttgcttatatcagaccctttggac
gcctgctcatctctacgcaatggacttcgaccaaacgaaactgataaaacaaggtttgct
ctgatagttagaggtgaatgtgctttcaaggataaagtccaaaatgctcaaaatgccgga
tttcgtggtgctattgtttatgacgatagagataaaggcaaattggtctacatgatgata
gagagtgtaaatattacaattcatgctgtatttgtttcgaaagcatctggtgaagtgtta
aaggagcatgctttaggggaagaaggggaatgctgcatcttcccatttcaaaatgaaaca
gcttggacagttctagctatatcttttatctcatttcttgtcatattgggtatacttata
atagccatctttgctccgagacactggctttattctcaaggaagaaaccagcttcctaaa
agtgtggataccaagattgtggaagctctaccttgcttcacattcagttccactagtttg
ggtgaatgccacagtgaagatacttgtgccatctgccttgagaattacaaagatgaggaa
attcttaaagttcttccctgccaacatgaatttcattcaagctgtgtggattcatggctg
acaaaatggggaacattctgccccgtgtgcaagcatgatataagaaccaaaattgtgaat
cccgagatcaaaagaaggacctggttgtacagctag

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