KEGG   Protobothrops mucrosquamatus (Taiwan habu): 107283943
Entry
107283943         CDS       T05763                                 
Symbol
BLM
Name
(RefSeq) Bloom syndrome protein
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
pmur  Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03440  Homologous recombination
pmur03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pmur00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    107283943 (BLM)
   03460 Fanconi anemia pathway
    107283943 (BLM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmur03032]
    107283943 (BLM)
   03400 DNA repair and recombination proteins [BR:pmur03400]
    107283943 (BLM)
Enzymes [BR:pmur01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     107283943 (BLM)
DNA replication proteins [BR:pmur03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    107283943 (BLM)
DNA repair and recombination proteins [BR:pmur03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     107283943 (BLM)
    Bloom's syndrome complex (BTR)
     107283943 (BLM)
   FA (Fanconi anemia) pathway
     107283943 (BLM)
SSDB
Motif
Pfam: DEAD RecQ_Zn_bind Helicase_C BDHCT BLM_N HRDC RQC Helicase_Sgs1
Other DBs
NCBI-GeneID: 107283943
NCBI-ProteinID: XP_029139155
Position
Unknown
AA seq 1153 aa
MAALPRNNLREQLQRYSARGALGSRAEPRPRPAKMNCLDVCTSGYMGGTKPTALKDKNTN
SSLEKQNGIKNKQTKINELFETTLKVEEGKQEDSNDQHVKNLDCFISSVKESDADCKVGG
SEIPTPEHNCSNNSFIDLTDSWEDMEDFETPGPQKRCPQQSVSFQDKWKTQMLHKEQEGG
SLPVPCLVPSNSSQRDFSNGEREEKSLESLQTGKKEKSWIGQNDSGLPLSGNEESEDGRD
DPQVFSESEDYVDFIPPSPEEEMLPASFVLKSTRTADETTLSPELSMSQLPEFGESSKRS
EGRKEGQSLLCVMEDICRLVDSIPERELKSLLGGPELLRLRDCRRKLLSNPRNGNRIGAD
TPLDINCKCNFDHVLPLIKNTPSRNATLEPFRGLAFPHSNEMLKIFHKKFGLHHFRTNQL
EAINAALLGQDCFILMPTGGGKSLCYQLPACVSVGVTIVISPLRSLIVDQVQKLTSMDIP
ATYLTGDKTGAEASRIYMQLSKKDPIIKLLYVTPEKVCSSGQLMSALENLYQRQLLARFV
IDEAHCVSQWGHDFRQDYKRLNMLRKKFSLVPMMALTATANPRVQKDILNQLEMHQPQVF
TMSFNRHNLKYDVLPKKPKTVALDCLQWIRKYHPGDSGIIYCLSRYECDSVANALQGGGL
SALAYHAGLPDGTRDLVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSIEGY
YQESGRSGRDGEVSHCLLFYSYSDVTRLRRLILMEREGNSHTRQTHFNNLYSMVHYCENI
MECRRIQLLAYFGETGFNPRFCKEHPEVSCDNCSKQQAYKLKNVTEEVKNIVMFVKEHCG
EKGTRNIKRTAGRYTLNMMIDIFLGSKSAKIQRGLFGKGAAYSRHNAERLFRKLVLDKIL
DEDLYISANDQAIAYIQLGEKAGALLNGFLQVEFCETESASNIRKQRALETKMSLREEMI
KKCLSELTDVCKNLGKVFNVHYFNIFNTATLKRIAETLSSDPAVLLRIDGVTEDKLEKYG
AEIIEVMQKYCSKILPAENKPLAATETDFSRCDSEDEEEATNTTSHYFQTKNGKGRKRKK
SNFFRESKKKKGSGGQQAYSKRSYKACKSTSAGSKNSTSCIIPGQPGAGKRPGIMTLPRP
QSRQYLKPSYVLL
NT seq 3462 nt   +upstreamnt  +downstreamnt
atggcggcccttccgcgcaacaacctgcgcgagcagctgcagcgttactcggccaggggc
gccctcggctcgcgcgcagagcccaggccgaggcccgcaaagatgaattgccttgatgtc
tgcacatcaggatatatgggtggaacaaaacctacggccttaaaggacaagaataccaat
tcttctttggaaaaacaaaatggtattaaaaataagcaaaccaaaattaatgagctgttt
gaaacaacactgaaagttgaagaaggaaaacaagaggattcaaatgatcaacatgtcaaa
aatttagattgttttatctcttctgtgaaagaaagtgatgcggactgcaaagtaggggga
tctgagatccctaccccggaacataattgttcaaacaactcatttattgaccttactgat
agttgggaagacatggaggactttgaaacacctggaccacagaaaagatgtccacaacag
tctgtatcatttcaagataagtggaaaacacaaatgcttcataaggaacaagagggaggc
agcctgcctgttccttgtcttgtcccttcaaattccagtcaaagagatttttcaaatgga
gaacgtgaagagaagtctttggaaagtctccagacaggaaaaaaagaaaaatcttggatt
gggcaaaatgattctggcctccctttaagtgggaatgaagagtctgaggatggaagggat
gaccctcaagtattcagtgagtctgaagactacgtggacttcatacccccgtccccagag
gaggagatgctgcctgcttcgtttgtgctgaagagcactaggacagctgacgagacaaca
ctgagtcctgaactctcgatgagtcaacttccagagtttggagaaagcagcaaaagaagc
gaaggaaggaaagaaggccagtccctcctatgtgtaatggaagatatctgtcgactggtg
gattccattccagaaagagagctgaagtctctgctaggcggtccagagctgcttcggctt
agagattgcagaagaaaactgttgagcaaccccagaaatggaaacagaattggtgctgat
acacctctagatataaactgcaaatgtaatttcgaccatgttcttccactaattaagaac
acaccttccagaaatgccaccctggaaccattcagaggtttagcatttccgcattctaat
gagatgctgaagatatttcataaaaagtttggcctccatcattttcggaccaatcagctt
gaagccattaatgctgctttgctgggtcaagactgcttcatcctgatgcccacaggaggt
ggcaagagtctgtgctatcagctgccggcctgtgtttcagtgggagtcaccatcgtcatc
tctcccttgaggtccctgatagtggatcaagttcagaagttgacctccatggatatccca
gccacgtacctcacaggtgacaagactggcgccgaagcatcccgaatttacatgcagctc
tccaagaaagaccccattataaaactcctctacgttactccagagaaggtctgctccagt
ggtcagctgatgtcagcgctggagaatctctaccagcgacagctcttggctcgctttgtg
attgacgaggcccactgcgtcagtcagtggggtcatgattttcgtcaagactacaagcgg
ctgaacatgctccgaaagaagttctccttggttcccatgatggcccttactgccaccgcc
aaccccagagtgcagaaggacatcctgaaccagctggagatgcaccagccccaggtgttt
actatgagctttaacaggcacaacttgaaatacgacgtactacccaagaaacccaaaact
gttgctctagattgcttacagtggatcaggaaataccaccctggtgactcaggaatcatt
tattgtctctcgcggtatgaatgtgactccgtggccaacgctctgcaagggggcggcctc
tctgccctggcctaccacgctggtctccctgacggcaccagagatctcgtgcagcagaaa
tggattaaccaggatggatgccaggttatctgtgccaccattgcatttggaatggggatt
gacaagcccgatgtgcgctttgtgatccacgcctccctccctaaatctattgaaggctat
tatcaggaatctggcagaagcgggcgggatggcgaagtctcccactgcctgcttttctac
agctatagcgacgtgaccagactgagacggctcatcctgatggaaagggaaggtaacagc
cacacccggcagacgcacttcaacaacctctacagcatggtccattactgcgagaacatc
atggaatgccggaggatacagttgctggcctactttggagaaacagggtttaatcccaga
ttttgtaaggagcaccctgaagtaagctgtgacaactgctccaagcaacaggcgtacaag
ttgaagaatgtgactgaagaagtaaaaaacattgtgatgtttgttaaggaacattgtggt
gaaaaaggaactagaaatatcaagagaactgcaggaagatacaccctcaatatgatgatt
gacattttcttgggttcaaaaagtgcaaagattcagcgtggcctctttggcaagggagca
gcctactcacgccataatgccgagcggctttttaggaagctggtgctggacaagattctg
gacgaagacctgtacattagtgctaacgatcaagcgatagcgtacatccagctgggggaa
aaagctggtgctctgctgaatggcttcttgcaggtggagttctgtgaaacagaaagtgcc
agcaatattcggaagcagagggctttggagaccaagatgtccctacgggaagagatgatt
aagaaatgtctctctgaactcacagatgtctgtaaaaaccttgggaaagtgtttaatgtc
cactattttaatatttttaacactgccacgttaaaaagaatagcagagactttgtcttca
gatccagcagttttgcttcggattgatggtgtgacagaagacaaattagagaaatatgga
gcagaaataatagaagtgatgcagaagtattgttcaaagatactaccagcggaaaacaag
cctcttgcagccacagagactgactttagcagatgtgatagtgaagatgaggaagaagca
acgaatacgacgtcccactatttccaaaccaaaaatggcaagggaaggaagaggaagaag
tctaatttttttagggaatcgaagaagaaaaaaggatctgggggacagcaggcttattct
aagaggagttacaaagcctgcaaaagcacttcggctggttctaaaaattctacttcctgt
attattcctggccagccgggagccggcaagaggcctggaatcatgacactgccaaggccc
caaagcagacaataccttaaaccttcttacgtgcttttgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system