KEGG   Pasteurella multocida subsp. multocida HN06: PMCN06_1371
Entry
PMCN06_1371       CDS       T01776                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
pmv  Pasteurella multocida subsp. multocida HN06
Pathway
pmv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pmv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PMCN06_1371 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmv03400]
    PMCN06_1371 (uvrA)
DNA repair and recombination proteins [BR:pmv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PMCN06_1371 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PMCN06_1371 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 nSTAND1 AAA_29 RsgA_GTPase AAA_21 AAA_23 AAA_25 DnaJ_CXXCXGXG NACHT Viral_helicase1 nSTAND3 APS_kinase cobW ScfRs Zn_Tnp_IS1595 zf_C2H2_10
Other DBs
NCBI-ProteinID: AFF24605
Position
complement(1472197..1475028)
AA seq 943 aa
MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARVGEPRC
PNHDVPLAAQTISQMVDKVLSLPEESKMMLLAPVVKERKGEHVKLLEQIAAQGYIRARID
GEICDLSDAPKLELHKKHTIEVVVDRFKVRSDLATRLAESFETALELSGGTAVVASMDEP
ETEELVFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEKRVVQNPSI
SLASGAVKGWDRRNFYYYQMLTSLAKHYEFDIESPFEALPKKIQQIILNGSGKEEIEFQY
MNDRGDVVVRHHAFEGILNNMARRYKETESMSVREELAKNISTCPCHDCGGSRLRQEARH
VYIGTTTLPDVAEKSIGETLHFFSELHLSGQRAQIAEKILKEIKERLQFLVNVGLDYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLLHLRNLGNT
VIVVEHDEDAIMAADHIIDIGPGAGVHGGQIVAEGPAKAIMANPHSITGKFLSGVEKIEI
PAKRTALNKKKMLKLDGATGNNLKSVNLAIPVGLFTCVTGVSGSGKSTLINDTLFPLAQN
ALNRAENTQFAPYQSISGLEFFDKVIDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPE
SRARGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCEQCKGKRYNRETLEIRY
KGKTIHQVLEMTVEEAREFFDAIPQIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKL
ATELSKRDTGKTLYVLDEPTTGLHFADIKQLLTVLHRLRDQGNTIVVIEHNLDVIKTADW
IIDLGPEGGNGGGQIIATGTPEQVAEVKGSHTARFLKTLLQKR
NT seq 2832 nt   +upstreamnt  +downstreamnt
atggataagattgaggtacgtggggcgagaacccataatttaaaaaatattaatttaact
attcctcgtgataaattaattgtgattacgggattatcgggatcaggtaaatcttcttta
gcctttgataccctgtatgctgagggacaacgccgttatgtagaatccttgtcggcatat
gcgcgtcaattcttatccctaatggaaaagccggatgtggatcacattgaaggattatcg
ccggcgatttctattgaacaaaaatctacttcacataatccgcgttcaacggtgggtacg
gtcaccgaaattcatgattacttacgtcttctttttgctcgagtaggggaaccgcgttgt
ccgaatcatgatgtgcctttagcggcacaaaccattagccagatggtggataaggtattg
agtttgcctgaagaaagcaaaatgatgttgctggctccagtggtgaaagaacgtaagggt
gaacatgttaaattattagagcaaattgctgcccaaggttatattcgagccagaattgac
ggtgaaatttgtgatttatctgatgcacctaaattagaattacataaaaaacatactatt
gaagtggttgtggaccgttttaaagtgcggtctgatttagccacaagattagccgaatcc
tttgaaacagcattggaattatccggtggcaccgctgtagttgcctccatggatgagcct
gaaacggaagaattggtcttttcggctaattttgcttgtccacattgtgggtattctgtc
ccagaattagaacctcgtttattttcttttaataatcctgccggggcgtgtccgacttgt
gatggcttaggtgtgcaacaatattttgatgaaaagcgcgtggtgcaaaacccgagtatt
tcgttagccagtggcgcagtaaaaggctgggatcgtcgtaacttctattactaccaaatg
ctcacctccttagcgaagcattatgaatttgatattgaatcaccttttgaggcactgccg
aaaaaaatccagcagattattttaaatggttcaggtaaggaagaaattgagtttcaatac
atgaatgatcgcggcgatgtagtcgtgcgtcatcatgcatttgaaggcattctaaataat
atggcacgccgttataaagaaacggaatccatgtcagtgcgtgaagaattagcgaaaaat
atcagtacctgtccttgccatgattgtgggggctcacgtttacgtcaagaggcacgtcat
gtgtatattggcaccaccactttacctgatgtggcagaaaagagtattggcgaaacgttg
catttctttagtgaattgcatttaagcgggcaaagagctcaaattgccgagaaaatctta
aaagaaattaaagagcgcttacaatttttggtcaatgtcgggttggattatctttccctt
tctcgttcagcagaaaccttgtctggcggggaagcacagcgaattcgtttagccagtcaa
attggtgcgggtttagtcggtgtgatgtatgtgctagatgagccgtctattggtttgcat
caacgtgataatgagcgattactgaatacattgcttcatttacgtaacttagggaacacc
gtaattgtggtagaacatgacgaagacgccattatggcggcagatcatattattgatatt
ggtcctggtgcaggggttcatggtgggcaaattgtggcagaaggtccggcaaaggcgatt
atggcaaatccacactcaattacggggaaatttttatctggggtcgagaaaatcgaaatt
cccgcaaaacggaccgcacttaataagaaaaaaatgctgaaattagacggggcaacgggg
aataatctgaaatcagtgaatttagccattccagtcggattgtttacctgtgtgacaggt
gtttcggggtcagggaaatcgaccttgattaatgatacgttgttcccattagcacaaaat
gccttgaatcgtgcggaaaatacgcaatttgcgccttatcaatccatttcgggtttggaa
ttttttgataaagtgattgatattgaccaaagtccaattggtcgtacaccgcgttcgaac
cctgccacttatactggcttatttacgccgattcgagaattatttgcgggcgtgcctgag
tcgagagcccggggttataatcccggacgttttagttttaatgtacgtggtggacgctgt
gaggcctgtcaaggcgatggtgtgattaaagtagagatgcactttttacccgatgtgtat
gtgccttgtgagcaatgtaagggaaaacgttataatcgagagactttagagatccgttac
aaaggtaaaacgattcatcaagtgttagagatgacggtggaagaagcgcgcgagtttttt
gatgcgattccgcagatcgcccgtaaattacaaactttaatggatgttggtttatcctat
attcgtttaggacaatcttcgactacgttatcgggtggggaagcgcaacgagtgaaatta
gcaacggagctttcaaaacgcgatacagggaaaactttgtatgtattagatgaaccgacg
acaggtttacattttgcagacattaaacagctattaacagtcttgcatcgtttacgtgat
caaggcaatacgatagtggtgattgagcacaatttagacgtgatcaaaacagccgattgg
attattgatttaggtcctgaaggggggaatggcggtggacaaattattgccacaggcaca
ccagaacaggtcgctgaagtgaaaggttcacataccgcacgcttcttaaaaacgctttta
caaaagcgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (27)   

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