KEGG T02041: B2K

Paenibacillus mucilaginosus K02: B2K_00030

Entry

B2K_00030         CDS       T02041

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

pmw Paenibacillus mucilaginosus K02

Brite

KEGG Orthology (KO) [BR:pmw00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmw03032]
    B2K_00030 (gyrB)
   03400 DNA repair and recombination proteins [BR:pmw03400]
    B2K_00030 (gyrB)
Enzymes [BR:pmw01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     B2K_00030 (gyrB)
DNA replication proteins [BR:pmw03032]
Prokaryotic type
  DNA Topoisomerases
   B2K_00030 (gyrB)
DNA repair and recombination proteins [BR:pmw03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      B2K_00030 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HVO_2248 HATPase_c_3

Other DBs

NCBI-ProteinID:

AFH59135

UniProt:

I0B9T8

Position

4438..6351

AA seq 637 aa
MSVNPGTTYDESQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVWEVVDNSIDEALAGYCT
RIEVIVHKDNSITVIDNGRGIPVGEHPKLKKSTLEVVLTVLHAGGKFGGEGYKVSGGLHG
VGVSVVNALSKKLEVQVKREGKVYQQEYRCGAPQYDIKEIGESEMTGTQVTFWPDEEIFT
ETTEYDFDTLQSRIRELAFLNKGIEIVLTDERTDISQTFIYEGGIISFVEHLNQNREPVH
QPPIYVEGEKDHIQVEVALQYNDSYTENIYSFANNINTHEGGTHESGFKSALTRILNEYA
RKYNAIKESDANLSGDDVREGLTAIISVKIPDPQFEGQTKTKLGNSEVRGIVESLFAEKL
EEFLQENPAIAKKIVEKGVQAQRAREAARKARELTRRKSALEVSSLPGKLADCSSKDASI
SEVYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNAEIRAIITALGTG
IGEDFDISKARYHKIIIMTDADVDGAHIRTLLLTFFFRYMRKLIEAGFVYIAQPPLYKLE
RNKTIRYAYNDKQREAIMAEFGEGAKVNVQRYKGLGEMNPGQLWETTMDPDSRTLLQVSI
QDAIDADVVFDTLMGDAVEPRRDFIQLHARYVKNLDI

NT seq 1914 nt +upstreamnt +downstreamnt
atgtctgtaaatccaggtacgacctatgatgaaagtcagatccaggtgcttgaaggtctg
gaggcggtacgaaagcggcccggtatgtatatcggctcgacgagcgcccggggccttcat
cacctggtgtgggaagttgtcgacaacagtatcgacgaagcgcttgcggggtactgtacg
cgcattgaggttattgttcacaaggataattccattaccgttatcgacaacggccgcggt
attccggtaggggaacatcccaagctcaaaaaatcgactctcgaagtcgtgctcaccgtc
cttcatgccggcggtaaattcggcggcgagggctataaagtttccggcggtctgcacggc
gttggtgtatccgtcgtgaatgctttgtccaagaagctcgaggtacaggtcaaacgggaa
ggcaaggtctatcagcaggaataccgctgtggagcgcctcagtatgacatcaaggagatc
ggtgaatccgagatgaccggtacccaggttaccttctggccggatgaggagatctttacc
gaaacgacggagtatgacttcgacacccttcaatcgcgtatccgtgaactggcgtttttg
aacaagggcattgagattgtgctgaccgatgagcgtacggatatctcccagacgttcatt
tacgagggcggcattatttcattcgtcgagcacttgaaccagaaccgggaaccggttcac
caaccgccgatctatgtggaaggcgagaaggatcatatccaggttgaagttgcgcttcag
tacaacgacagctatacggagaatatttattcgttcgcgaacaatatcaatacccatgag
ggcggaacccacgagtccggattcaagagcgcccttacccggattctgaatgagtatgca
cgcaaatataatgcgatcaaagagagcgatgcaaacctgtccggcgacgatgtccgcgaa
ggcctgacggcgattatctccgtgaagatcccggatccccagttcgagggacagacgaag
acgaaactcggcaacagcgaggtccgcgggattgtggagtctctgttcgctgagaagctc
gaagagtttcttcaggagaacccggcgatcgcgaagaagatcgtggagaaaggcgtacag
gcgcagcgtgcccgtgaagcggcgcgtaaggcccgtgaactcacccggcgcaagagtgcc
ctggaggtaagttcccttcccggcaagctcgccgactgctcttcgaaggacgcttcgatc
tccgaagtgtatatcgtcgaaggggactccgcaggcggttccgccaagcagggacgcgac
cgccacttccaggcgatcctgccgctgcgcggtaagattctcaacgttgagaaagcacgt
ctcgacaagattttgtccaatgcggagatccgtgcgatcattaccgccttggggacggga
atcggggaggattttgacatctccaaagcccgctaccacaaaatcatcatcatgacggat
gcggacgtcgacggagcgcatattcggacgctgctgctcaccttcttcttccgctacatg
cgcaagctgatcgaagcgggattcgtgtacatcgctcagccgcctctctataagctggag
cggaacaagacgatccgttacgcgtacaacgacaagcagcgcgaggccatcatggcggag
ttcggtgaaggcgccaaagtcaacgtccagcgctacaagggtctaggagagatgaacccg
ggccagctgtgggagacgaccatggatcccgacagccgtacgctgctgcaggtcagcatc
caggacgccatcgacgcggacgtcgtgttcgataccctgatgggcgatgcggttgaaccg
cggcgcgactttattcagctccacgcaagatacgtgaagaacctggatatttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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