KEGG   Persephonella marina: PERMA_0275
Entry
PERMA_0275        CDS       T00870                                 
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
pmx  Persephonella marina
Pathway
pmx00300  Lysine biosynthesis
pmx01100  Metabolic pathways
pmx01120  Microbial metabolism in diverse environments
pmx01230  Biosynthesis of amino acids
Module
pmx_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pmx00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PERMA_0275 (dapE)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pmx01002]
    PERMA_0275 (dapE)
Enzymes [BR:pmx01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     PERMA_0275 (dapE)
Peptidases and inhibitors [BR:pmx01002]
 Metallo peptidases
  Family M20
   PERMA_0275 (dapE)
SSDB
Motif
Pfam: Peptidase_M20 M20_dimer Peptidase_M28
Other DBs
NCBI-ProteinID: ACO03163
UniProt: C0QTQ6
Position
complement(249299..250360)
AA seq 353 aa
MREKLKDYLTDLVNIPSVTGNERDIADYVENFLKKLFPEENIIRYNNSIIAFDSINPDKK
TISFIGHLDTVPGENEFTGKIIDNRLYGLGASDMKGGLAVMMALAEYFKDRDKRFNCIYV
FYEREEGPYDENGLEPLLRNFSIIQRSDLAVVLEPTNNNIQVGCLGTMHASVIFKGKRAH
SARPWQGENAIHRSADFLKRLSELKWKEYTFGGLKFVEVMNATMVDYSGGRNIIPDRFVI
NVNYRFAPGKSIEEAKKDVLDLVKGEAEVQFTDLCPSGKVCLDNPVLQELINRFSLKVEA
KQAWTDVARLSLYGVDAVNFGPGDPAQAHQKNEYIPLKNLYENFDILRDFLEG
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgagagaaaagctgaaagattatctgacagatcttgtaaatatcccatctgtaactgga
aatgagagggatattgctgactacgttgaaaactttttaaaaaagctctttcctgaagag
aatataatcagatacaacaactctatcatcgcttttgacagcataaaccctgataaaaaa
acgatctcatttataggacatctggataccgttccaggtgagaatgagtttacagggaag
atcattgataacaggctttacggtcttggtgcttccgatatgaaaggtggtcttgctgtt
atgatggctcttgctgagtatttcaaagacagggataaaagatttaactgtatctatgtg
ttttatgagagggaagaaggaccttacgatgagaacggtcttgaaccactgctcagaaat
ttcagtatcatccagagatcagatcttgctgtcgttcttgaaccaacaaacaacaatata
caggttggatgtcttggaactatgcatgcatctgtaatattcaaaggaaaaagagcccac
tcagcaagaccgtggcagggtgagaatgctatacacagatctgcagactttcttaaaagg
ctttctgaacttaaatggaaggagtatacatttggcggacttaagtttgttgaggttatg
aatgcaacaatggttgattactcaggtgggagaaatataatccctgacaggtttgttata
aatgttaactacaggtttgcacctggaaaaagtatagaggaagcaaaaaaggatgtatta
gatcttgtaaaaggcgaggctgaggttcagtttacagatctctgtccctcaggaaaggta
tgccttgataaccctgttctgcaggagcttataaacagattttctcttaaggttgaggca
aaacaggcatggacagatgttgcgagactttcactttatggtgtagacgctgtaaatttt
ggtcctggagatccagctcaggctcaccagaagaatgagtatattcctttaaaaaatctt
tatgagaactttgatatactgagggattttttagagggttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

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