KEGG   Persephonella marina: PERMA_1501
Entry
PERMA_1501        CDS       T00870                                 
Name
(GenBank) poly A polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
pmx  Persephonella marina
Pathway
pmx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PERMA_1501
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmx03019]
    PERMA_1501
Enzymes [BR:pmx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     PERMA_1501
Messenger RNA biogenesis [BR:pmx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     PERMA_1501
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: ACO03450
UniProt: C0QRH3
Position
1443139..1444110
AA seq 323 aa
MLGIEKLLEKILHRQKLPKEEREKIDIDIKTKYVHGLLFYNSYFDHLSKALSKDTVCLIV
GGWIRDRLLNRPLSKKIDIDFLVTTDPFEIVKRFKKILGKGDIFRFEKEKDVATIIFYEG
DHRYRFDFSYFDISDIMENPDLDFYDKEREIIKRIEQDLMTRDFTINAMAVVFDDTIGLG
ASQTVLFDPSGGLEDLQAGIVRPVSYENIEKDPVRILRGYRIAQEIDFEIDSDFERWVKK
NASLVKNAPSERLRDEILKIFDKERSADTVDRLIKAGLLQQIIPEIESMIKIRKTGDFHK
YDLLNHSLKTVEYMEQFLKKKRF
NT seq 972 nt   +upstreamnt  +downstreamnt
atgcttgggattgagaaacttcttgagaagatactgcacagacagaagctccctaaggaa
gagagggaaaagatcgatattgatataaagaccaagtatgttcacggtcttcttttttat
aactcttactttgatcatctatcaaaagccctctcaaaggacacagtatgccttatcgtt
ggtgggtggataagggacagacttctgaacagacctctatcaaaaaagattgatatagac
tttctcgtcacaacagatccatttgagatagtaaaaagatttaaaaagatactgggaaaa
ggtgatatattccgttttgaaaaggaaaaggatgttgcaaccataatcttttatgaaggt
gatcacaggtacagatttgatttctcgtactttgatatatctgacataatggaaaatccc
gaccttgatttttacgacaaggaaagggagataataaaaaggatagaacaggatcttatg
acaagggattttaccataaatgcgatggctgtagtctttgatgatactataggactcgga
gcttcacagacggtactttttgatccatcaggtggacttgaggatcttcaggcgggaata
gtaagacctgtatcctatgagaatatagagaaagatcctgtaaggatacttagaggttac
agaatagcacaggagatagattttgagatagacagtgattttgagagatgggtaaagaaa
aatgcttcccttgtaaagaatgcaccatctgagagattgagggatgagatacttaagata
tttgataaagaaagatcagctgatacagttgacagacttataaaagcaggtcttcttcag
cagatcatcccagaaattgaaagtatgataaaaataagaaaaacaggtgatttccacaag
tacgatcttttaaatcactcccttaaaacagttgagtatatggagcagttcttaaaaaaa
aagagattttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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