KEGG   Pseudomonas mendocina ymp: Pmen_0266
Entry
Pmen_0266         CDS       T00510                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pmy  Pseudomonas mendocina ymp
Pathway
pmy00300  Lysine biosynthesis
pmy00470  D-Amino acid metabolism
pmy01100  Metabolic pathways
pmy01110  Biosynthesis of secondary metabolites
pmy01120  Microbial metabolism in diverse environments
pmy01230  Biosynthesis of amino acids
Module
pmy_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pmy00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Pmen_0266
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Pmen_0266
Enzymes [BR:pmy01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     Pmen_0266
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: ABP83040
UniProt: A4XNX4
Position
complement(275540..276370)
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLISQHAHVQPKHAKQWGDRHTGVGFDQLLIVEPPSHPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKKTIRVETKSGVIELRVQNDGQVCVNM
GAPRLEPAQVPFQAEQAALTYRVDVEGQSVELAALSMGNPHAVLRVDNVDSAPVHTLGPK
LEHHPRFPQRVNVGFLQVLDRKHARLRVWERGAGETQACGTGACAAAVAAIRQGWMDSPV
QLELPGGKLSIEWAGEGQPVMMTGPAARVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctattgcgctttaccaagatgcacggcctgggcaatgacttcatggtcctcgacctg
atcagtcagcatgcccacgtgcaacccaaacatgccaagcagtggggcgaccgtcacacc
ggcgtcggcttcgatcagttgctgatcgtcgaaccgccgagccacccggacgtcgacttc
cgctaccgcatcttcaactccgacggctccgaggtggagcagtgcggcaacggcgcgcgc
tgcttcgcccgcttcgtgctggacaagcgcctgaccaccaagaagaccattcgcgtcgag
accaagagcggcgtgatcgaactgcgcgtgcagaacgacggccaggtctgcgtcaacatg
ggcgcaccgcgtctggagccggcgcaggtgccgttccaggccgagcaggcggcgctgacc
tatcgcgtcgacgtcgaaggtcagagcgtcgagctggctgcgctgtcgatgggcaacccg
catgccgtgctgcgcgtcgacaacgtcgacagcgccccggtgcacaccctcggaccgaag
ctggaacatcacccgcgctttccgcagcgggtcaacgtcggcttcctgcaggtgctggac
cgcaagcatgcgcgcctgcgcgtgtgggagcgcggcgccggcgaaacccaggcctgcggc
accggcgcctgcgccgccgcggtcgcggcgattcgccagggctggatggattcgcccgtg
caactggaactgccaggcggcaaactgtccatcgaatgggcaggcgaaggtcagccggtt
atgatgaccgggcccgctgcccgcgtatacgaaggacaggttcgcctatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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