KEGG   Pseudomonas mendocina ymp: Pmen_0541
Entry
Pmen_0541         CDS       T00510                                 
Name
(GenBank) penicillin-binding protein, 1A family
  KO
K05366  penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
Organism
pmy  Pseudomonas mendocina ymp
Pathway
pmy00550  Peptidoglycan biosynthesis
pmy01100  Metabolic pathways
pmy01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:pmy00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Pmen_0541
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Pmen_0541
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:pmy01003]
    Pmen_0541
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pmy01011]
    Pmen_0541
Enzymes [BR:pmy01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     Pmen_0541
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Pmen_0541
Glycosyltransferases [BR:pmy01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   Pmen_0541
Peptidoglycan biosynthesis and degradation proteins [BR:pmy01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   Pmen_0541
SSDB
Motif
Pfam: Transgly Transpeptidase PCB_OB CyanoTRADDas_TM
Other DBs
NCBI-ProteinID: ABP83311
UniProt: A4XPP5
Position
complement(578348..580759)
AA seq 803 aa
MIRLLKFFWWSCVAVFCGLLLSLSGAFLYLSPTLPSVESLRQVQLQIPLRVYSSDAKLIA
EFGEMRRSPIRFDEIPKEFISALLAAEDDNFANHYGVDVTSLMRAATQLLKSGQIQSGGS
TITMQVAKNFFLTSERSFSRKATEILLALQIERELSKDEILELYVNKIYLGHRAYGIEAA
AQVYYGKSIRDLNLAQMAMIAGLPKAPSRYNPLVNPTRAKERRDWILGRLYRLGRIDQAS
YETALAEEVDARYHVPAPELSAPYIAEMARAEMVGRYGSEAYTEGFNVTTTVPSHLQEVA
NTALREGLIAYDQRHGYRGPESRLPGLTRDAWLAELAKFRSIGGLEPAVVTQVEKSGVLV
LTRNGEEQAVSWDSMKWARPFLNTNSLGPRPQQPADVAQVGDIIRVQRQADESLRFMQVP
AAQSALVSLDPYSGAIQALVGGFSFDQSNYNRAVQAKRQPGSSFKPFIYSAALDNGYTAS
TLVNDAPIILSDDYLTQKWRPKNDNNTFLGPIRMREALYKSRNLVSIRLLQDMGIDRSLR
YIERFGFAPQDLPRNLSLALGTASLTPLEIAEGWATFANGGYKIEPYLIERIDDRHGKPL
FRANPARVPGSEPSEEIANLAVNATDDLPPEEPRTAEQIIDERTAYIMTSMLQDVIKRGT
GRRALALGRDDLAGKTGTTNESKDSWFSGYNADYVTTVWAGFDQPESLGRHEYGGTVALP
IWMNYMGAVLKDRPSHLPKEPKGLLTLRVDPVSGRAAAPGTPDAYFELFKSEDSPPPMSE
FEPGMGIPGSPLPADEMAPIDLF
NT seq 2412 nt   +upstreamnt  +downstreamnt
ttgatacgcctgctgaagttcttctggtggtcttgcgttgccgttttttgtgggctgttg
ctcagtttgagcggtgcgtttctttatcttagcccgacccttccgtccgtcgagtcgctg
cgccaggtgcagttgcagatcccgctgcgcgtgtacagcagcgatgccaagctgatcgcc
gaattcggcgagatgcgccgctcgcccatccgcttcgatgaaatccccaaggagttcatc
agtgccctgctggccgccgaggacgataatttcgccaaccattatggcgtcgatgtgacc
agtctgatgcgcgctgccacgcaattattgaagagcgggcagattcagagcggcggcagc
accatcaccatgcaggtggcgaagaacttcttcctgaccagcgaacgcagcttctcgcgc
aaggccacggagatcctcctggccctgcagatcgaacgcgagctgagcaaggacgagatc
ctcgagctctacgtcaacaagatctacctcggccaccgcgcctatggcatcgaggctgcc
gcgcaggtgtattacggcaagtcgattcgcgatctgaacctggcgcagatggccatgatc
gccggactgccgaaggcgccgtcgcgctacaacccgctggtcaatccgacccgtgccaag
gaacgccgcgactggattctcggccgcctctaccgcctcggacgcattgaccaggccagc
tacgaaaccgccctggccgaagaagtcgatgcccgctaccacgtcccggcgccggagctg
agcgcaccttacatagccgagatggcacgcgccgagatggtgggtcgctatggcagcgag
gcctacacggaaggcttcaacgtcaccaccaccgtccccagccatcttcaggaagtggcc
aataccgcgctgcgcgaagggctgatcgcctacgatcagcgtcacggctaccgcggcccc
gagagccggctaccgggtctgacccgcgacgcctggctggcagagctggccaagttccgc
tccattggcggcctggaaccggccgtggtcactcaggtggaaaaaagcggcgtcctcgtc
ctgacccgcaacggcgaagagcaggcggtgtcctgggacagcatgaaatgggcgcgcccc
ttcctcaacaccaacagcctcggcccacgcccccagcaaccggcggacgtggcccaggtc
ggcgacatcattcgtgtgcagcgtcaggcggacgaaagcctgcgcttcatgcaggtaccg
gcggcgcaaagcgcgctggtctccctcgacccctacagcggcgccattcaggcactggtc
ggcggcttctccttcgaccagagcaactacaaccgcgccgtccaggccaagcgtcagccc
ggctccagcttcaagcccttcatctatagtgccgcgctggacaatggctacacggcctcg
accctggtcaacgacgcgccgatcattctctccgacgactatctgacgcagaagtggcgc
ccgaagaacgacaacaacaccttcctcggcccgattcgcatgcgcgaggcgttgtacaag
tcgcgcaacctggtgtccattcgcctgctgcaggacatgggcatcgaccgcagcctgcgc
tacatcgaacgcttcggcttcgctccgcaggacctgccgcgcaacctgtccctggccctg
ggcaccgccagcctgacaccgctggagatcgccgagggctgggccaccttcgccaacggc
ggctacaagatcgagccctacctgatcgagcgcatcgatgaccgccacggcaagccgctg
ttccgcgccaaccccgcgcgcgtacccggcagcgagccatcggaggagatcgccaatctc
gccgtgaacgccaccgacgacctgccgccggaagaacccaggacggccgaacagatcatc
gacgaacgcaccgcctacatcatgaccagcatgctgcaggacgtgatcaagcgcggcacc
ggtcgtcgtgccctggccctgggccgcgatgacctggccggcaagaccggcaccaccaac
gagtccaaggacagctggttctccggctacaacgccgactacgtgaccaccgtctgggcc
ggcttcgaccaaccggagagcctgggtcgccacgagtatggcggcaccgtggccctgccg
atctggatgaactatatgggcgcggtgctcaaggaccgcccgagccatctgccgaaggaa
cccaagggcctgctgaccctgcgcgtcgatccggtcagcgggcgcgccgcagcacctggc
acccccgacgcctacttcgagctgttcaagagcgaggactcgccgccgccgatgagcgaa
ttcgaaccgggcatgggcattcctggcagcccgctgccggccgacgagatggcgccaatc
gatctgttctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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