KEGG   Pseudomonas mendocina ymp: Pmen_0610
Entry
Pmen_0610         CDS       T00510                                 
Name
(GenBank) type I secretion outer membrane protein, TolC family
  KO
K12340  outer membrane protein
Organism
pmy  Pseudomonas mendocina ymp
Pathway
pmy01501  beta-Lactam resistance
pmy01503  Cationic antimicrobial peptide (CAMP) resistance
pmy02020  Two-component system
pmy03070  Bacterial secretion system
pmy04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:pmy00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pmen_0610
  09132 Signal transduction
   02020 Two-component system
    Pmen_0610
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    Pmen_0610
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Pmen_0610
   01503 Cationic antimicrobial peptide (CAMP) resistance
    Pmen_0610
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pmy02000]
    Pmen_0610
   02044 Secretion system [BR:pmy02044]
    Pmen_0610
   01504 Antimicrobial resistance genes [BR:pmy01504]
    Pmen_0610
Transporters [BR:pmy02000]
 Other transporters
  Pores ion channels [TC:1]
   Pmen_0610
Secretion system [BR:pmy02044]
 Type I secretion system
  alpha-Hemolysin/cyclolysin transporter
   Pmen_0610
  RTX toxin transporter
   Pmen_0610
  Multiple protein transporter
   Pmen_0610
  RaxAB-RaxC type I secretion system protein
   Pmen_0610
Antimicrobial resistance genes [BR:pmy01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump AcrEF-TolC [MD:M00696]
    Pmen_0610
   Multidrug resistance, efflux pump MdtEF-TolC [MD:M00697]
    Pmen_0610
SSDB
Motif
Pfam: OEP
Other DBs
NCBI-ProteinID: ABP83378
UniProt: A4XPW2
Position
672523..673965
AA seq 480 aa
MLRRLSLAVAIAAASVGLAQAEEAPLSSKTDLVTVYQEAARNNADIAAARADYQARREVV
PQARAGLLPNLSAGANYGDTRTEVDSPSATVSRSGLVYQANLSQPLFRADRWFQLQAAEA
TSEQAALELSATEQNLILQSAETYFAVLRAQDTLASTKAEEAAFKRQLDQANERFDVGLS
DKTDVLEAQAGFDTARANRLLAERAVDDAFEALVTLTNRDYLAVEGIVHTLPVLAPTPND
AKAWVDTAAAQNLNLQASLYAVTAAEENLRQRKAGHAPTLDAVASYQKGDNDSLGFTNSG
AFGAPRYSGDVSQRSIGLQLNIPLYSGGLTSSQVREAYQRLGQTEQLRESLRRQVVQNTR
NLFRAVNTDVETVQARRQSIISNQSALEATEIGYQVGTRNIVDVLDAQRQLYSAVRNYND
ARYDYILNNLRLKQAAGTLSPADLEALGSFLKPDYNPDEDFLPPDLASAAESRLQGNPDF
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgttgcgcagactttccctggctgttgctattgccgctgcttcggtgggcctggcccag
gccgaagaggccccgctatcgagcaagaccgacctggtcaccgtgtatcaggaagcggcg
agaaacaacgccgatatcgccgccgcgcgcgccgattatcaggctcgccgcgaagtggta
ccgcaggcccgtgccgggctgctgcccaacctttccgcaggcgccaactacggggacacg
cgcactgaagtcgattcgccgagcgccaccgtctcgcgcagcggtctggtctatcaggcc
aacctcagccagccactgttccgcgccgatcgctggttccagctgcaggcggccgaggcc
accagcgaacaggctgctctggagctgtccgccaccgaacagaacctgatcctgcagagc
gccgagacctacttcgccgtgctgcgtgcccaggacaccctggcttcgaccaaggccgag
gaggcggcattcaagcgtcagctggatcaggccaacgaacgtttcgacgtcgggctttcc
gacaagaccgacgtgctcgaggcgcaggccggtttcgataccgcgcgtgccaaccgcctg
ctcgccgagcgtgccgtggatgacgccttcgaagcgctggtgaccctgaccaaccgcgac
tacctggccgtcgaagggatcgtccacaccctgccggtgctggcgccgacaccgaacgat
gccaaggcctgggtcgataccgctgcagcgcagaacctcaacctgcaggccagcctgtat
gccgtcacggctgctgaagagaacctgcgccagcgcaaggccggccatgcgccgaccctg
gacgccgtggccagctatcagaagggtgacaacgacagcctgggcttcaccaattctggc
gcctttggcgcgccgcgctacagcggcgacgtctcccagcgctccatcggcctgcagctg
aacattccgctgtacagcggcggcctgaccagctcccaggtgcgcgaggcctaccagcgt
ctggggcagaccgagcagctgcgcgaaagcctgcgtcgccaggtggtgcagaacacccgc
aacctgttccgcgcagtgaacaccgacgtggaaaccgtgcaggcccgtcgtcagtcgatc
atctccaaccagagtgccctggaagccaccgagatcggttatcaggtcggtacccgcaac
atcgtcgacgtgctcgatgcccagcgtcagctgtacagcgccgtgcgcaactacaacgat
gcgcgctacgactacatcctcaacaacctgcgcctgaagcaggccgccggcaccctcagc
ccggccgacctggaagcgctgggcagcttcctcaagccggactacaacccggacgaggac
ttcctgccgccggatctggcctcggccgccgagtcgcgcctgcagggcaatccggatttc
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (8)   
   KEGG PATHWAY (5)   
   KEGG MODULE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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