KEGG   Pseudomonas mendocina ymp: Pmen_0924
Entry
Pmen_0924         CDS       T00510                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
pmy  Pseudomonas mendocina ymp
Pathway
pmy00470  D-Amino acid metabolism
pmy00550  Peptidoglycan biosynthesis
pmy01100  Metabolic pathways
pmy01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:pmy00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Pmen_0924
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Pmen_0924
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Pmen_0924
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pmy01011]
    Pmen_0924
Enzymes [BR:pmy01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Pmen_0924
Peptidoglycan biosynthesis and degradation proteins [BR:pmy01011]
 Precursor biosynthesis
  Amino acid ligase
   Pmen_0924
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 ATP-grasp ATP-grasp_3 GARS_A ATP-grasp_5 RimK ATPgrasp_YheCD TTL
Other DBs
NCBI-ProteinID: ABP83692
UniProt: A4XQS6
Position
1044262..1045203
AA seq 313 aa
MSLHSSLDPKAFGRVAVLFGGKSAEREVSLKSGNAVLSALQAAGVDAFGIDVGDDFLQRL
ASEKIDRAFIVLHGRGGEDGSMQGLLECAGIPYTGSGILASALAMDKLRTKQVWHSLGLP
TPRHAVLTSQADCEAAAAELGFPLIVKPAHEGSSIGMAKVESVEALIAAWQDAARYDSQV
LVEQWIAGPEYTVAVLRGEVLPPIGLGTPHSFYDYDAKYLADDTQYRIPCGLSAEKEAEL
KELTARACEAVGTQGWARADVMQDASGQFWLLEVNTVPGMTDHSLVPMAARAAGLDFQQL
VLAILADSVEARG
NT seq 942 nt   +upstreamnt  +downstreamnt
atgagtttgcacagtagcctcgatcccaaggctttcggtcgcgtcgccgtgctgttcggc
ggcaagagcgccgagcgcgaggtgtcgctgaaatccggcaatgccgtgctcagcgccctg
caggcggccggggtggacgccttcggcatcgacgtgggcgatgatttcctgcagcgcctt
gccagcgagaagatcgaccgcgccttcatcgtgctgcacggccgcggtggcgaggatggc
tccatgcagggcctgctcgagtgcgccggcattccctacaccggcagcggcatcctcgcc
tcggcgctggccatggacaagctgcgtaccaagcaggtctggcacagcctcggcctgccg
acgccgcgtcacgccgtgctcacgtcgcaggccgactgcgaagcggcggctgccgaactg
ggtttcccgctgatcgtcaagccggcccatgaaggctccagcatcggcatggccaaggtc
gagagcgtcgaggcgctgatcgcggcctggcaggacgccgcgcgctacgacagtcaggta
ctggtcgagcagtggatcgccggccccgagtacaccgtggccgtgctgcgtggcgaagtg
ctgccgcccattggcctgggcacgccgcacagcttctacgactacgacgccaagtacctg
gccgatgacacccagtaccgcattccctgcggcctctcggccgagaaggaggcggaactg
aaagagctgaccgcgcgcgcctgcgaggccgtgggcacccagggctgggcgcgtgcagac
gtgatgcaggatgccagtggccagttctggctgctggaagtgaacaccgtaccgggcatg
accgatcacagcctggtaccgatggccgcgcgcgccgccggtctggatttccagcagctg
gtactggcgatcctggccgacagcgtcgaggcgaggggttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (11)   
   Pfam (11)   
All databases (31)   

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