KEGG   Pseudomonas mendocina ymp: Pmen_3624
Entry
Pmen_3624         CDS       T00510                                 
Name
(GenBank) chaperone protein DnaK
  KO
K04043  molecular chaperone DnaK
Organism
pmy  Pseudomonas mendocina ymp
Pathway
pmy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Pmen_3624
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmy03019]
    Pmen_3624
   03110 Chaperones and folding catalysts [BR:pmy03110]
    Pmen_3624
   03029 Mitochondrial biogenesis [BR:pmy03029]
    Pmen_3624
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmy04147]
    Pmen_3624
Messenger RNA biogenesis [BR:pmy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Pmen_3624
Chaperones and folding catalysts [BR:pmy03110]
 Heat shock proteins
  HSP70 / DNAK
   Pmen_3624
Mitochondrial biogenesis [BR:pmy03029]
 Mitochondrial protein import machinery
  Matrix
   MMC/PAM proteins
    Pmen_3624
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Proteins involved in Fe-S cluster biogenesis
    Pmen_3624
Exosome [BR:pmy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Pmen_3624
  Exosomal proteins of breast cancer cells
   Pmen_3624
  Exosomal proteins of colorectal cancer cells
   Pmen_3624
SSDB
Motif
Pfam: HSP70 MreB_Mbl FGGY_C Hydantoinase_A CATASP
Other DBs
NCBI-ProteinID: ABP86372
UniProt: A4XYF6
Position
complement(3999151..4001064)
AA seq 637 aa
MGKIIGIDLGTTNSCVSILENGNVKVLENAEGARTTPSIIAYANDGEILVGQSAKRQAVT
NPHNTLYAVKRLIGRRFDEDVVQKDIQMVPYKIVKADNNDAWVEVNGQKMAPPQISAEVL
KKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYG
MDKAKGDHTVIVYDLGGGTFDVSVIEIAEVDGEHQFEVLATNGDTFLGGEDFDIRLIDYL
VDEFKKETGMNLKGDPLAMQRLKEAAEKAKIELSSSQQTDVNLPYITADATGPKHLNVKI
SRSKLESLVEDLVQRTIEPCRTALKDAGIDVSKIDDVILVGGQTRMPLVQKTVAEFFGKE
PRKDVNPDEAVAMGAAIQGAVLAGDVKDVLLLDVSPLTLGIETMGGVMTALIEKNTTIPT
KKSQVFSTADDNQSAVTIHVLQGERKQAAQNKSLGKFDLAEIPPAPRGVPQIEVTFDIDA
NGILHVSAKDKATGKQQSIVIKANSGLSEEEIQQMVRDAEANAEEDRKFEELATARNQGD
QLVHATRKMLTEAGDKATADEKEAIEKAIGELEVAVKGDDKAAIEAKMNALSEATTPLAQ
KMYAEQPQGAAQPGAEESKDAADDVVDAEFEEVKENK
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgggcaaaatcatcggtatcgacctggggaccaccaactcctgcgtctccattctggaa
aacggcaacgtcaaggtgctggagaacgccgaaggcgctcgcaccacgccgtccatcatc
gcttacgccaacgatggcgaaatcctggttggtcagtcggccaagcgtcaggccgtcacc
aacccgcacaacaccctatacgcggttaagcgtctgatcggtcgtcgttttgacgaagac
gtcgtgcagaaagacatccagatggtgccgtacaagatcgtcaaggcggacaacaacgac
gcctgggtcgaagtgaacggccagaagatggccccgccgcagatcagcgccgaagtgctg
aagaagatgaagaagaccgccgaggactacctgggcgagccggtgaccgaagcggtgatc
accgtgccggcctacttcaacgacagccagcgtcaggccaccaaggatgccggtcgcatc
gccggtctcgacgtcaagcgtatcatcaacgagccgaccgcggcggcgctggcctatggc
atggacaaggccaagggcgaccacaccgtgatcgtctacgacctgggtggcggtaccttc
gacgtgtcggtgatcgagatcgccgaagtcgacggcgagcaccagttcgaagtgctggcc
accaacggtgacaccttcctcggtggtgaggacttcgacattcgcctgatcgattacctc
gtcgacgagttcaagaaagaaaccggcatgaacctcaagggcgacccgctggccatgcag
cgcctgaaggaagctgccgagaaggccaagatcgagctgtcctcgagccagcagaccgac
gtcaacctgccgtacatcactgcagacgccaccggtccgaagcacctgaacgtgaagatt
tcccgttccaagctcgagtcgctggtcgaggacctggtgcagcgcaccatcgagccgtgc
cgcactgcgctgaaggacgccggtatcgacgttagcaagatcgacgacgtgatcctggtc
ggcggccagacccgtatgccgctggtgcagaagaccgttgccgagttcttcggcaaggag
ccgcgcaaggacgtcaacccggacgaagccgtggccatgggcgctgccattcagggcgcg
gtactggctggtgacgtcaaggacgtgctgctgctggacgtctccccgttgaccctgggt
atcgaaaccatgggcggcgtgatgaccgcgctgatcgagaagaacaccaccatcccgacc
aagaagtcgcaggtgttctccactgccgacgacaaccagagcgccgtgaccattcacgtg
ctgcagggcgagcgtaagcaggctgcgcagaacaagtccctcggcaagttcgacctggcc
gagattcctccggctccgcgtggcgtgccgcagatcgaggtgaccttcgatatcgatgcc
aacggcatcctgcacgtgtccgccaaggacaaggccaccggcaagcagcagtccatcgtg
atcaaggccaactccggtctgtccgaggaagagatccagcagatggtgcgtgacgccgag
gccaacgccgaggaagaccgcaagttcgaggagctggccaccgcgcgtaaccagggcgat
cagctggtgcatgccacccgcaagatgctcaccgaagcgggcgacaaggccactgccgac
gagaaggaggccatcgagaaggccatcggcgagctggaagtggccgtgaaaggcgacgac
aaggccgccatcgaggccaagatgaacgcactgtccgaagccaccacgccgctggcgcag
aagatgtatgccgagcagccgcagggcgccgctcagccgggcgcggaagagtcgaaggac
gctgccgacgacgtggtcgacgctgagttcgaagaggtcaaggagaacaagtaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system