KEGG   Pseudomonas mendocina ymp: Pmen_4259
Entry
Pmen_4259         CDS       T00510                                 
Name
(GenBank) A/G-specific DNA-adenine glycosylase
  KO
K03575  A/G-specific adenine glycosylase [EC:3.2.2.31]
Organism
pmy  Pseudomonas mendocina ymp
Pathway
pmy03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pmy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Pmen_4259
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmy03400]
    Pmen_4259
Enzymes [BR:pmy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.31  adenine glycosylase
     Pmen_4259
DNA repair and recombination proteins [BR:pmy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Pmen_4259
 Prokaryotic type
     Pmen_4259
SSDB
Motif
Pfam: NUDIX_4 HhH-GPD HHH HHH_5 RecR_HhH HHH_8
Other DBs
NCBI-ProteinID: ABP87006
UniProt: A4Y090
Position
4663324..4664391
AA seq 355 aa
MSPEQFNSAVLAWYDQHGRKDLPWQQNITPYRVWVSEIMLQQTQVSTVLGYFDRFMAALP
TVKDLAEAPEDEVLHLWTGLGYYTRARNLQKSAQIIMREHGGEFPRSVEALAELPGIGRS
TAGAIASLSMGVRAPILDGNVKRVLARYVAQEGYPGEPKVAKQLWDIAERLTPHERVGHY
TQAMMDLGATLCTRSKPTCLLCPVRSGCQAHLLGLEIRYPVPKPRKTLPQKRTLMPLLVN
ASGDILLYRRPSTGLWGGLWSLPELDDLGQLADLGQQQQLELGERQELEGLTHTFSHFQL
AIEPWLVRVTEQPSRVAEGDWLWYNLATPPRLGLAAPVKKLLKRAAQAITAGEPT
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgagtcccgagcagttcaacagcgccgtgctggcctggtatgaccagcacgggcgcaag
gatctgccctggcagcagaacatcaccccgtatcgtgtctgggtttcggaaatcatgctg
cagcagacccaggtcagcaccgtgctcggctacttcgatcgctttatggccgcactgccg
accgtgaaggacctggccgaagcgcccgaggatgaagtactgcacctgtggaccggcctg
ggctactacacccgcgcgcgcaacctgcagaagagcgcgcagatcatcatgcgcgagcac
ggcggcgagttcccccgcagcgtcgaggcgctggccgagctgcccggcatcggccgctcc
accgccggcgccatcgccagcctgagcatgggcgtgcgtgcgccgatcctcgacggcaac
gtcaaacgcgtactcgcgcgctacgtggcgcaggagggctatcccggcgagccgaaggtg
gccaagcagttgtgggacatcgccgagcgcctcacgccgcacgaacgggtcggccactac
acccaggcgatgatggacctcggcgccaccctctgcacccgcagcaaacccacctgcctg
ctgtgcccggtgcgcagcggctgccaggcgcatctgctcggcctggaaatccgctacccg
gtgcccaagccgcgcaagacgctgccgcagaagcgcaccctgatgccgctgctggtcaac
gcctctggcgacatcctgctctatcgccgcccctccaccgggctgtggggtgggctgtgg
agcctgccggaactggacgatctcgggcagctcgcagacctcggccagcagcaacagctc
gagcttggcgagcgccaagagctggaaggcctgacccacaccttcagccacttccagctg
gccatcgaaccctggctggtgcgggtgaccgagcagccgagccgcgtggccgagggcgac
tggctctggtataacctcgccaccccgccgcgcctgggcctcgccgccccggtgaagaag
ttgctcaaacgcgcggcgcaagccattaccgctggagaaccgacatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system