KEGG   Prevotella melaninogenica: HMPREF0659_A5467
Entry
HMPREF0659_A5467  CDS       T01286                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
pmz  Prevotella melaninogenica
Pathway
pmz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pmz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HMPREF0659_A5467 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmz03400]
    HMPREF0659_A5467 (xth)
Enzymes [BR:pmz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     HMPREF0659_A5467 (xth)
DNA repair and recombination proteins [BR:pmz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     HMPREF0659_A5467 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: ADK96468
Position
I:complement(614989..615738)
AA seq 249 aa
MKFISWNVNGLRACVGKEFEQQFKDLDADFFCLQETKMQAGQLDLSFPGYESYWNYADKK
GYSGTAIYTKHKPLSVTYGIDIDEHDHEGRVITLEMEDFYLVTVYTPNSQDGLRRLEYRM
KWEDDFQAYLHKLDEKKPVIVCGDMNVAHQEIDLKNPKTNHKNAGFTDEEREKMTQLLSN
GFIDTFRTLYPEQVTYSWWSYRFRAREKNTGWRIDYFLISERLKDRLEDAKIHTEIMGSD
HCPVEIILK
NT seq 750 nt   +upstreamnt  +downstreamnt
atgaagtttatttcatggaatgtaaacgggcttcgcgcctgtgtaggaaaggaatttgag
cagcaattcaaggacttggatgctgatttcttctgcctacaagagacaaagatgcaagca
ggacagctcgatctcagttttcctggttatgaatcttattggaattacgcagacaagaag
ggctattctggtacggcaatatacacaaagcataagccattgagtgtgacttatggtatt
gatattgatgagcacgaccatgagggacgtgtaattacactcgagatggaagacttctac
ctcgtaactgtttatacaccgaactcacaggatgggcttcgtcgattggagtatcgtatg
aagtgggaagatgacttccaagcctatctccacaaactcgatgagaaaaagcctgttatc
gtatgtggtgacatgaatgttgctcatcaggagatagaccttaagaacccaaagacaaac
cacaagaatgctggttttactgatgaagagcgtgagaagatgacccaattactaagtaat
ggcttcatcgacaccttccgtaccctttatccagagcaggttacttattcttggtggtca
tatcgtttccgtgcaagagagaagaatacggggtggcgtatcgactatttcctaatctca
gaacgtctcaaagaccgcctcgaagatgctaagattcatacagagattatgggaagcgac
cactgtcctgtggaaattatcttgaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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