KEGG   Polaromonas naphthalenivorans: Pnap_2848
Entry
Pnap_2848         CDS       T00459                                 
Name
(GenBank) integration host factor, alpha subunit
  KO
K04764  integration host factor subunit alpha
Organism
pna  Polaromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:pna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pna03032]
    Pnap_2848
   03036 Chromosome and associated proteins [BR:pna03036]
    Pnap_2848
   03400 DNA repair and recombination proteins [BR:pna03400]
    Pnap_2848
DNA replication proteins [BR:pna03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Pnap_2848
Chromosome and associated proteins [BR:pna03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    Pnap_2848
DNA repair and recombination proteins [BR:pna03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      Pnap_2848
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: ABM38149
UniProt: A1VR71
Position
complement(2989392..2989763)
AA seq 123 aa
MEFSVESLETPALTKAHLAELLFEQIGLNKRESKEMIDAFFELISDRLVEGKDVKISGFG
NFQIRTKAPRPGRNPRTGEAIPIESRRVVTFHASHKLKEQIQGSALLGLKTANIFAEDNG
PVT
NT seq 372 nt   +upstreamnt  +downstreamnt
atggaattttcagttgaaagcctggaaaccccggcgctgaccaaggcgcatctggctgaa
ttgctgtttgagcaaattgggcttaacaaacgtgaatccaaagaaatgattgacgcgttt
ttcgagctgatttcagatcgcctggtcgaggggaaggatgtgaaaatttccggttttggc
aatttccagattcgtaccaaagccccacgtcccggccgtaatccacgaacgggggaggcc
attcccatagagtcgcgtcgggtcgtgacatttcatgcaagccacaaactcaaggagcag
atacagggaagtgccttgctggggttaaagacagcaaatatttttgccgaggacaatgga
cctgtaacttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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