KEGG   Polaromonas naphthalenivorans: Pnap_3085
Entry
Pnap_3085         CDS       T00459                                 
Name
(GenBank) pseudouridine synthase, RluA family
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
pna  Polaromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:pna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pna03009]
    Pnap_3085
Enzymes [BR:pna01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     Pnap_3085
Ribosome biogenesis [BR:pna03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Pnap_3085
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ABM38384
UniProt: A1VRV6
Position
complement(3255310..3256506)
AA seq 398 aa
MKHIIGAASGKAKRPAKAPFRPAVAPAQPTIHAPAAPKTPEPATALPQATLVTVDEDYAG
QRLDNFLIRQLKGVPKTHVYRIIRSGEVRVNKGRAHADTRVEAGDIVRLPPVRTSERAEQ
KAQAMQSVMTEVARHGASSTVGGYAPAAEFPILFEDDFLLAIDKPAGVAVHGGSGVSFGI
IEQLRMARPEADFLELVHRLDRETSGILLIAKRRMALKLLQEQFRERETDKVYLALVSGN
WPANQRVIDKALHKYLLPNGERRVKIVANDHPDAMRSVTLVKVKTPIAANPLAPATPFTL
LEVTIKTGRTHQIRVHLAGEGHPIAGDDKYGDFELNKALQRSSAGSASLKRMFLHAWSLK
FNHPKTRKAVQLQASLPEELQQFLPSRHSSSPEETGNS
NT seq 1197 nt   +upstreamnt  +downstreamnt
gtgaaacacattataggggcagcttctggcaaggcaaaacgcccggcaaaagcgcctttc
cgtcctgctgtcgctccggcccagcccaccattcatgcgcctgcagcgcctaaaacgcct
gagccggccaccgctttgccgcaggcgacgctggtcacggtcgatgaagactacgctggc
cagcggctcgacaatttcctgattcgccagctcaagggcgtgcccaaaacccatgtttac
cgcatcatccgcagcggcgaagtgcgcgtcaacaagggccgggcgcatgccgacacccgc
gtcgaggccggcgacatcgtgcgcctgccgccggtgcgcacctcggagcgggccgagcag
aaggcccaggcgatgcagagcgtgatgaccgaagtcgcgcgccacggcgccagctcgacc
gtcggcggctacgcgcccgccgctgaattcccgatcctgttcgaggacgacttcctgctc
gccatcgacaagccggccggcgtggcggtgcatggcggcagcggcgtgagctttggcatc
atcgagcagctgcgcatggcccggcctgaggccgatttcctggaactggtgcaccggctg
gaccgcgaaaccagcggcatcctcttgattgccaagcgccgcatggccctgaaactgctg
caggagcagttccgggagcgcgaaaccgacaaggtttacctggcgctggtcagcggcaac
tggccggcgaaccagcgcgtgattgacaaggcgctgcacaaatacctgctgcccaatggc
gagcggcgcgtcaagatcgtggccaacgaccatcccgacgccatgcgctcggtcacgctg
gtcaaggtgaaaacgccgattgccgccaacccgctggcgccagcgacgcctttcacgctg
ctcgaagtcaccatcaagaccggccgcacgcaccagatccgcgtgcatctggccggcgag
ggccatccgattgccggcgatgacaaatatggcgatttcgaactgaacaaggcgctgcaa
agaagcagcgcgggctctgcgtcgctcaagcgcatgttcctgcatgcctggagcctgaag
ttcaaccatcccaaaacccgcaaggcggttcagctgcaggcgtccttgcccgaggagttg
cagcaatttctgccgtcgcgtcattcctcgtctcccgaagaaaccgggaattcttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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