KEGG   Polaromonas naphthalenivorans: Pnap_4201
Entry
Pnap_4201         CDS       T00459                                 
Name
(GenBank) Conjugal transfer protein
  KO
K20531  type IV secretion system protein TrbF
Organism
pna  Polaromonas naphthalenivorans
Pathway
pna02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pna00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Pnap_4201
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pna02044]
    Pnap_4201
Secretion system [BR:pna02044]
 Type IV secretion system
  Trb secretion system protein
   Pnap_4201
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: ABM39484
UniProt: A1VV06
Position
pPNAP01:78409..79113
AA seq 234 aa
MRFKRSLVRYADTPQPATPYQSAEQVWDDRIGSSRVQAKNWRLMAFGCLVLALLMAGGLV
WRSAQSIVTPFVVEVDSGGQVRAVGEAATPYKPNDAQTAHHLGRFVTLVRSLSIDPIVVR
QNWLDAYDYTTDRGAAVLNDYARTNDPFARIGKESVTVQITSIVRASEASFNVRWTERRY
VNGAAAGLERWTAVVSIVLQTPRTEERLRRNPLGIYVNGLSWSRELDSSEGAKP
NT seq 705 nt   +upstreamnt  +downstreamnt
atgcgattcaaacgctcattggtgcggtatgcggacacgccgcagcctgccaccccgtac
caatccgccgaacaggtctgggacgaccgtatcggttcatctcgcgtgcaggcaaagaac
tggcggttgatggctttcggttgcctggtgctggccttgctgatggctggcggtttggtc
tggcgctcggcgcagtccatcgtcacaccctttgtggtggaggtggacagcggcgggcag
gtgcgcgctgtcggtgaagcggccacgccctacaagccgaacgatgcgcagacggcccat
cacttggggcgcttcgtcacgctggtgcgctcgctgtccattgaccccatcgtcgtgcgg
cagaactggctggatgcctatgactacaccaccgaccggggtgctgcggtactcaacgac
tacgcacgcaccaacgatccctttgcccgcattggcaaagagtcggtgacggtgcagatc
accagcatcgtgcgcgccagcgaggcatcgttcaacgtgcgttggaccgagcgccgctat
gtcaacggcgcagctgctggactggagcgctggaccgctgttgtgtccatcgtccttcaa
acgccgcgcaccgaggaacggctgcgccgcaatccgctgggcatctacgtcaatgggttg
tcgtggagccgtgaactcgattcttccgaaggagccaaaccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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