KEGG   Polaromonas naphthalenivorans: Pnap_4203
Entry
Pnap_4203         CDS       T00459                                 
Name
(GenBank) conjugation TrbI family protein
  KO
K20533  type IV secretion system protein TrbI
Organism
pna  Polaromonas naphthalenivorans
Pathway
pna02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pna00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Pnap_4203
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pna02044]
    Pnap_4203
Secretion system [BR:pna02044]
 Type IV secretion system
  Trb secretion system protein
   Pnap_4203
SSDB
Motif
Pfam: TrbI
Other DBs
NCBI-ProteinID: ABM39486
UniProt: A1VV08
Position
pPNAP01:80126..81445
AA seq 439 aa
MSQANNAPDTPDSAVPDVPPKVAPENVTLRSQPRPVTRLNRRMLAVLAGGLATAVLGGTI
WSLQSTQRRGAGDQKELYNVDRVSRSEGLDRLPADYSKLPPTLPAPVPQLGAPLPGDLGG
PIHKAEQQAQGYGYQQPGHDPAEVERLARLKQAEEAAASSVFFRSGGQKVAAAAQPQALP
VATALAANAAFDPMAAGPASTAAQSADPTAVQNRQDQKEAFLSKAGSTETRNSGSLQMSA
SPYQVMAGTVIAAALVTGIKSDLPGDVIATVTEPVYDTATGKYVLIPQGSRLLGKYNSQV
SYGQSRVQVVWNRVILPDTSSFQLDKLIGTDPAGYAGLEDGVDWHWDRVFAGAALTTLLG
IGAELAAPENRNGGDRVIIAGRDSLKDSVNQAGQEMTRRNMNMQPTLTERPGLPVRVIVN
RDLVLRPYQPLFFVRGGLR
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgagccaagcgaacaatgcccctgataccccagattccgcagtgccagacgtgccgccc
aaagtggccccggaaaacgtgacgctgcgctcccagccgcgtccagttacgcgcctgaac
cgacgcatgctggccgtcctcgctggagggctggcgaccgccgtactcggtggcactatc
tggtcgttgcaatcaacgcagcgccgtggcgctggcgaccagaaggagttgtacaacgtt
gatcgcgtgtcgcgctcggaagggcttgatcgactgccagcggactattccaagctgccg
ccgaccctgccagccccagtgccacaactcggtgcgccgctgccaggcgacttgggtggc
ccgatccacaaggccgagcaacaggcgcagggttatggctatcagcagcccggccatgat
ccggccgaggttgagcgcctggcgcgtttgaagcaggccgaggaagcggcggcgtcttca
gtgttcttccgttcgggtggtcaaaaggtggccgcagccgcgcagccgcaggccttgcct
gtggccaccgcgttggccgcgaatgccgcctttgatccgatggccgctggcccggcatcg
actgccgcgcagtcggctgaccccactgcggtgcagaaccggcaagaccagaaggaggcg
tttctgtccaaagccggttctacggaaacccgtaattccggctccctgcaaatgtccgca
tcgccgtatcaagtcatggcgggcacggtgatcgccgccgcgctggtcacgggcatcaag
tccgacctgccgggcgatgtgatcgccacggtgacggagccggtctacgacacggccacc
ggcaagtacgtgctgatcccgcagggctcgcgcctgctgggcaagtacaacagccaggtg
agttatggacagagccgcgtgcaggtggtgtggaatcgggtcatcctgccggatacgtcc
tcgttccagctcgacaagctgatcggtaccgatccggcgggctatgcgggtctggaagat
ggtgtggactggcattgggatcgcgtctttgccggtgctgcgctgacgaccttattgggc
atcggtgccgagctggccgcaccggagaatcgcaatggcggcgatcgcgtaatcatcgcc
ggacgcgacagcctgaaggactctgtaaaccaagcgggccaagagatgacccggcgaaat
atgaacatgcagccgacgctaaccgagcgacccggcttgccggtgcgcgtcatcgtcaac
cgggatctggtgctgcgaccgtaccaaccacttttctttgtgcgtgggggattgcgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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