KEGG   Polaromonas naphthalenivorans: Pnap_4878
Entry
Pnap_4878         CDS       T00459                                 
Name
(GenBank) Exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
pna  Polaromonas naphthalenivorans
Pathway
pna03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Pnap_4878
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pna03400]
    Pnap_4878
Enzymes [BR:pna01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     Pnap_4878
DNA repair and recombination proteins [BR:pna03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Pnap_4878
SSDB
Motif
Pfam: Exonuc_VII_L DUF5710 tRNA_anti_2
Other DBs
NCBI-ProteinID: ABM39942
UniProt: A1VWB4
Position
pPNAP03:54079..55809
AA seq 576 aa
MANIFLTVPFKDKDAAKGLGARWDAAQRQWFVPDGRELAPFALWLPAGLVPALNSGDVLS
IPDEPGTPAMPVRNGVSLSSLLGDVSRAVAQAYKAGVWTLVEVVELRANGGHVYLEVSER
DAHGAVLAKARAVIWQSTASAILPEFERATGAQLAPGIKLLVRARPVFKAQYGFSLDIDA
IDPAYTLGELEARKRDIRTRLQAEGVFAANKNLPPPWDFHNVLVVSPMGGAGLGDFQAEA
DRLQAHGICRFTYALSRFQGEGAPAEIRDALQAALGQGTGTVATPFDAVVIIRGGGAVND
LAWLNDYSLARLVCDLPIPVLTGIGHERDTTLLDEVAHARYDTPSKVIAGIEQRILQRVD
EVKANFEQVSALAARASQAAREQAGKLDMTVRLEALRHLAQGRQAASQSLAAIRIDAMQC
MRSAAEQSRDALQAVKTKVLTQLADAKRGVPALWSQIALGSEHALRTASAEGDSFIGSVL
ERARQDASRARQVSSDALNTVSNSAKLLVRKAATDSQALIREIAGQGPEKTLQRGFAIVR
NQSGKPLTRALQARDGAAIEIEFQDGRVAAITQKRL
NT seq 1731 nt   +upstreamnt  +downstreamnt
atggccaacatcttcctcaccgtccctttcaaggacaaagacgccgccaaaggtcttggc
gcccggtgggatgccgctcagcgccaatggtttgtacccgatggccgcgaacttgcgcct
tttgctttgtggctgccggcgggtttggtcccggcattgaactcaggagacgttctttcg
attccggacgagcctggaacgcctgctatgcccgtcagaaatggcgtttccctgtccagt
ctcctgggcgatgtgtcacgggccgtggcgcaggcctacaaggccggggtctggacactg
gtcgaagtcgtcgagctccgggccaacggtggccatgtctacctggaagtgtccgagcgc
gacgcccacggggcggtgctggccaaggcccgggccgtcatctggcagtcaacggccagc
gccatccttccggagttcgagcgcgccaccggcgcccagctggcgcctggcatcaagctc
ctggtgcgggcccggcctgtcttcaaggcccagtacgggttcagcctggatatcgatgcc
attgacccggcgtacaccttgggcgagctggaggcgcgcaagcgcgacatccggacgcgg
cttcaggccgagggggtgtttgccgccaacaagaacctgccgccgccctgggactttcat
aacgtcctggtggtctcgcccatgggcggggccggcctgggcgacttccaggccgaggct
gaccggctgcaagcgcatggcatttgccgcttcacgtatgccttgagccgctttcagggg
gaaggcgccccggcggaaatacgcgatgcattgcaggcagccctggggcaggggactgga
accgtcgcaaccccgttcgatgccgtggtcatcatccgcggcggcggcgctgtcaatgac
ctggcttggctcaatgattacagtttggcgcgcctcgtgtgcgacctgcccattcccgtg
ctgaccggcatcggccatgagcgggacaccaccctgctcgatgaagtggctcatgcccgg
tacgacacgccgagcaaggtcattgccggcatcgagcagcgcatcctccagcgggtcgac
gaggtcaaggcgaacttcgagcaggtctcagccctggcggcccgggccagccaggcagcc
agggagcaggccggcaagctcgacatgaccgtgcggctggaggccttgcggcatctggcc
cagggcagacaagcggcatcgcagagcctggcagccattcgcatcgatgccatgcagtgc
atgcggtcggccgctgaacaatcgcgggatgccttgcaggccgtcaaaactaaagtgttg
acgcaactggctgatgccaagcgcggcgtcccggcactgtggagccagattgccctgggc
agcgagcatgcgcttcgaacggcctcggcagaaggcgattcgtttattggcagcgttttg
gagcgcgcccggcaggatgcgtcacgcgcaaggcaagtcagcagtgacgcattaaacaca
gtctcgaattcggccaagctgcttgttcggaaagctgcgaccgattcacaagccttgata
cgagaaatcgctgggcaggggccggaaaaaacacttcaacgcggctttgccatcgtgcga
aaccaaagcggcaagccgctaaccagggccttgcaggcaagggacggcgcagctatcgaa
atcgagttccaggatggccgggttgcggccatcacacaaaaacgcctttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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