KEGG   Pseudomonas aeruginosa NCGM2.S1: NCGM2_0087
Entry
NCGM2_0087        CDS       T01974                                 

Definition
(GenBank) hypothetical protein
  KO
K11901  type VI secretion system protein ImpB
Organism
pnc  Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pnc00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    NCGM2_0087
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pnc02044]
    NCGM2_0087
Secretion system [BR:pnc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NCGM2_0087
SSDB
Motif
Pfam: T6SS_VipA Herpes_UL69
Other DBs
NCBI-ProteinID: BAK86979
Structure
PDB: 
4UQY 4UQZ 5N8N

Position
1:105212..105730
AA seq 172 aa
MGSTTSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLAGKPAEPQAAVADR
KFLEIDVDNFDARLKAMKPRVAFNVPNVLTGEGNLSLDITFESMDDFSPAAVARKVDSLN
KLLEARTQLANLLTYMDGKTGAEEMIMKAIKDPALLQALASAPKPKDDEPQA
NT seq 519 nt   +upstreamnt  +downstreamnt
atgggaagcactaccagcagtcagaagttcatcgccaggaaccgggcgccacgcgtgcag
atcgagtacgacgtggagctgtacggtgccgagaagaaggtccagctgcccttcgtcatg
ggcgtcatggccgacctcgccggcaagcccgccgaaccccaggcggcggtcgccgaccgc
aagttcctggagatcgacgtggacaacttcgatgcccggctgaaggcgatgaagccgcgg
gtggccttcaacgtaccgaacgtgctgaccggcgaaggcaacctgagcctggacatcacc
ttcgagagcatggacgacttcagccccgccgcggtggcgcgcaaggtcgattcgctgaac
aagctgctcgaggcgcgtacccaactggccaacctgctgacctacatggacggcaagacc
ggcgccgaggaaatgatcatgaaggcgatcaaggacccggccctgcttcaggccctggcc
agcgcgccgaagcccaaagacgacgagccgcaggcgtaa

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