KEGG   Pseudomonas aeruginosa NCGM2.S1: NCGM2_0839
Entry
NCGM2_0839        CDS       T01974                                 
Symbol
trbF
Name
(GenBank) TrbF-like protein
  KO
K20531  type IV secretion system protein TrbF
Organism
pnc  Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pnc00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NCGM2_0839 (trbF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pnc02044]
    NCGM2_0839 (trbF)
Secretion system [BR:pnc02044]
 Type IV secretion system
  Trb secretion system protein
   NCGM2_0839 (trbF)
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: BAK87722
Position
1:complement(915753..916457)
AA seq 234 aa
MRFKRPQVRYADTPQPATPYQAAAQVWDDRIGSARVQAKNWRLMAFGCLVLALLMAGGLV
WRSAQSIVTPYVIEVDQAGQVRAVGEAATPYRPGDAQIAHHLARFVTLVRSLSIDPIVVR
QNWLDAYDYTTDKGAAVLNDYARTNDPFARIGKESVTVQITSVVRASDTSFNVRWTEQRY
VNGAPAGTERWNAVLSTVLQTPRTEQRLLKNPLGIYVNGLSWSRELDSSEGAKP
NT seq 705 nt   +upstreamnt  +downstreamnt
atgcgattcaaacgaccgcaggtgcgctacgccgatacgccgcagcctgccaccccgtat
caagccgccgcccaggtgtgggacgaccgtatcggctccgcccgcgtgcaggcgaagaat
tggcgcctgatggccttcggctgcctagtgctcgcgctgttgatggccggcggcctggtg
tggcgctcggcgcagtccatcgtgacgccctatgtcatcgaggtcgatcaagccgggcag
gtgcgcgccgtgggagaggccgccacgccgtaccggcccggcgacgcgcagatcgcgcac
cacctggcgcgcttcgtgacgctggttcgctcgctgtccatcgaccccatcgtggtgcgg
cagaactggctcgatgcctacgactacaccaccgacaagggcgcggcggtgctcaacgac
tacgcccgcaccaatgacccattcgcccgcatcggcaaggaatcggtaacggtgcaaatc
accagcgtggttcgcgcgagcgacacgtctttcaacgtgcgctggacagagcagcgctat
gtcaacggtgcgcccgccggcaccgaacgctggaacgccgtgctttcgaccgtcctgcaa
accccgcgtactgaacagcgcctgctcaagaacccattgggtatctacgtcaacggcctg
tcatggagccgcgaactggattcttccgaaggagccaaaccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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