KEGG   Pseudomonas aeruginosa NCGM2.S1: NCGM2_3381
Entry
NCGM2_3381        CDS       T01974                                 
Name
(GenBank) putative ClpA/B-type protease
  KO
K11907  type VI secretion system protein VasG
Organism
pnc  Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc02025  Biofilm formation - Pseudomonas aeruginosa
pnc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pnc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NCGM2_3381
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    NCGM2_3381
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pnc02044]
    NCGM2_3381
Secretion system [BR:pnc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NCGM2_3381
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 Clp_N AAA_22 AAA_16 nSTAND3 Zeta_toxin ClpB_D2-small AAA_7 Sigma54_activat AAA_14 AAA_25 T2SSE ResIII IstB_IS21 NACHT AAA_28 FtsK_SpoIIIE Tropomyosin DUF4140
Other DBs
NCBI-ProteinID: BAK90229
Position
1:3618999..3621548
AA seq 849 aa
MELAALIGRLNPDCRRALEHAAQRCLQRTHHYVEIEHLLLELLDIDGGDFACLLPRFGLE
RDALVAEINLSLELFKAGNTRTPALSAHTIGLLEDAVVHASVLGQAQIRSGLLLLALLDR
EERRALLLNSASSLLRIPHEALQANLLEWIQASREQPAAPNRPAAGGDKPESAPDPLLDQ
YTQDLTAEARAGRIDPIVGRDGEIRQCVDILLRRRQNNPILVGAPGVGKTAVVEGLALRI
AAGEVPPSLQEVILRVLDLGLLQAGASMKGEFEQRLKGVIDAVRNSAQPIILFIDEAHTL
IGAGGAEGGSDAANLLKPALARGELRTLAATTWLEYKKYFEKDPALTRRFQLVQVEEPDE
ATAVEMLRGIAGKLELHHGVQIMDAAIVDAVKLSHRYISGRQLPDKAISVLDTACARVAL
GQHDVPPPLESLRHREQALEEELQRLRREQATGLDHSARITALESESGDNRRTIRELETR
WDEEREAVRELLDTRRELLALSESADAAKPDEELDGRIDHLAAELARLAAGLEAIRQDDP
LVPEQVDSRTVAAVIAGWTGIPVGKMLADEAHAIRSLAQRMGQRVMGQEAALGAIAQRIQ
AYRAGLSDPAKPVGVFLLPGPTGVGKTETAYALADALYGGERNLISINLSEYQEAHTVSQ
LKGAPPGYVGYGSGGVLTEAVRRKPYSVVLLDEIEKAHPDVLEAFYNVFDKGVMEDGTGL
VVDFRNTVILATSNVGAELLLDSPAEQVATPAFDERLRKVLLQTFRPAFLARMTVVPYRP
LEEATLEGIVVAKLEKLRERYKAATGKQFDFDPAIVKAVLAKCSAAGARDIENVLMAQVT
GKLAEWVLE
NT seq 2550 nt   +upstreamnt  +downstreamnt
atggaactcgccgccctgatcggccgcctcaacccggactgtcgccgcgccctggagcac
gccgcgcaacgctgcctgcaacgcacccatcattacgtagagatcgagcacctgctgctg
gagctgctggacatcgacggcggcgacttcgcctgcctgctgccgcgcttcggcctggag
cgcgacgccctggtcgccgagatcaacctgtcgctggagctgttcaaggccggcaatacc
cgcactccggcgctgtccgcgcacaccatcggcctgctcgaggacgccgtggtccacgcc
agcgtgctcggccaggcgcagatccgttccggcctgctgctgctcgccctgctcgaccgc
gaggagcgccgcgccctgctgctgaacagcgcgtcgtcgctactgcggattccccacgag
gccttgcaggccaacctgctggagtggatccaggcctcccgcgaacagccggccgcgccg
aaccgcccggcggcaggcggcgacaagccggaaagcgccccggacccgctgctcgaccag
tacacccaggacctcaccgccgaagcccgcgccgggcgcatcgaccccatcgtcgggcgc
gacggggagatccgccagtgcgtcgacatcctcctgcgccggcggcagaacaacccgatc
ctggtcggcgcgccgggcgtcggcaagaccgcggtggtcgagggcctggccctgcgcatc
gccgccggcgaggtgccgccgtcgttgcaggaggtgatcctgcgggtgctcgatctcggc
ctgttgcaggccggcgccagcatgaagggcgagttcgagcagcgcctcaagggcgtgatc
gacgccgtgcgcaacagcgcgcagccgatcatcctgttcatcgacgaggcgcacacgctg
atcggcgccggcggcgcggaaggcggcagcgacgccgccaacctgctcaagccggccctg
gcgcgcggcgagttgcgcaccctggcggccaccacctggctggaatacaagaaatacttc
gagaaggacccggcgctgacccggcgcttccaactggtccaggtcgaggagccggacgag
gccaccgccgtggagatgctgcgcggcatcgccggcaagctggaactgcatcacggcgtg
cagatcatggacgcggccatcgtcgatgcggtgaagctgtcgcaccgctacatctccggc
cgccagttaccggacaaggcgatcagcgtgctcgacaccgcctgcgcgcgggtcgccctc
ggccagcacgacgtgccgccgccgctggaaagcctgcgccaccgcgagcaggcgctggaa
gaggaattgcagcggctgcgccgggaacaggccaccggcctcgaccacagcgcgcgtatc
accgccctggaaagcgagtcgggcgataaccgccggaccatccgcgagctggagacccgc
tgggacgaggaacgcgaagcggtgcgcgaactgctcgacacccgccgcgaattgctggcc
ctcagcgaaagcgccgacgcggccaagcccgacgaggaactggacggtcgcatcgaccac
ctggccgccgaactggcgcgcctggcggccggcctcgaagccatccgccaggacgacccg
ctggttcccgagcaggtggactcgcgtaccgtggccgcggtgatcgccggctggaccggc
atcccggtgggcaagatgctcgccgacgaagcccacgccatccgttccctggcgcaacga
atgggccagcgggtgatgggccaggaggccgccctgggcgccatcgcccagcgcatccag
gcctatcgcgccggactcagcgacccggccaagccggtcggcgtattcctcctgcccggc
cccaccggcgtgggcaagaccgagaccgcctacgccctggccgacgccctctacggcggc
gaacgcaacctgatcagcatcaacctctccgagtaccaggaggcccacaccgtcagccag
ctcaagggcgccccgcccggctacgtcggctacggcagcggcggcgtgctcaccgaagcg
gtgcgccgcaagccctattcggtggtgctgctggacgagatcgagaaagcccatccggac
gtgctggaagccttctacaacgtgttcgacaagggtgtgatggaagacggcaccggcctg
gtggtggacttcaggaacaccgtgatcctcgccaccagcaacgtcggcgccgaactgctg
ctggacagcccggccgaacaggtcgccaccccggccttcgacgagcgcctgcgcaaagtc
ttgctgcaaaccttccgcccggcgttcctcgcgcgcatgaccgtggtgccttaccggccg
ctggaggaagccaccctggaaggcatcgtcgtggccaagctggaaaaactgcgggaacgc
tacaaggccgctaccggcaaacagttcgacttcgacccggccatcgtcaaggccgtgctc
gccaagtgcagcgcggcgggcgcgcgggatatcgagaacgtgctgatggcgcaggtgacg
gggaagttggcggagtgggtactcgaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (22)   
   Pfam (22)   
All databases (30)   

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