KEGG   Polynucleobacter necessarius: Pnec_0413
Entry
Pnec_0413         CDS       T00683                                 
Name
(GenBank) Ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pne  Polynucleobacter necessarius
Brite
KEGG Orthology (KO) [BR:pne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pne03019]
    Pnec_0413
   03009 Ribosome biogenesis [BR:pne03009]
    Pnec_0413
   03036 Chromosome and associated proteins [BR:pne03036]
    Pnec_0413
Enzymes [BR:pne01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Pnec_0413
Messenger RNA biogenesis [BR:pne03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Pnec_0413
Ribosome biogenesis [BR:pne03009]
 Eukaryotic type
  90S particles
   RNase
    Pnec_0413
 Prokaryotic type
  rRNA processing factors
   Pnec_0413
Chromosome and associated proteins [BR:pne03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Pnec_0413
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: ACB43691
UniProt: B1XTL4
Position
368677..369468
AA seq 263 aa
MNARAIIETGPLQERLGYTFKKPELLNQALTHRSHSKKNNERLEFLGDSILNCVVAEMLY
ERYSDLDEGDLSRVRANLVKQQALYEIAQTLSLSDYLRLGEGELKSGGFRRPSILADTLE
AVTGAIFLDGGFEAAKTSLRKLYSIILAHVDPKTLGKDDKTLLQECLQSYQLPLPAYNVT
GTTGAAHNQQFEVECLIPSHKVAVKGEGASRRAAEQAAAKLALIAMMKALPQESRKPKKT
RSAKKKAAKKEITEEQFNLKLKG
NT seq 792 nt   +upstreamnt  +downstreamnt
atgaatgcgcgcgccattattgaaactggaccgctgcaagagcgccttggctacaccttc
aagaagcccgaattactaaatcaagccttaactcaccgcagtcacagcaaaaagaataat
gagcgtctcgagtttctgggtgattctattttgaattgcgttgtagcagaaatgctttac
gaacgttactcagatttagatgagggcgacctttctcgtgtgcgtgcaaacttagtaaag
cagcaggccttatatgaaattgcccaaactttatcgttatcggattacttgcgcttaggc
gagggcgaattaaagagtggcggctttcgtcgcccttcaatcctggccgataccctagag
gctgtcactggcgcgattttcctagatggtggctttgaggcggctaagacaagcttacgt
aagctgtattccatcattttggcgcacgtggatccaaaaactttgggcaaagacgataaa
acgcttctacaagaatgtttgcagagttatcagttgccattgcctgcctataacgttacc
ggcactactggcgctgcacataaccagcagtttgaagtggagtgcttgatccccagtcat
aaggtggctgtaaagggtgagggcgcgtcgcgtcgtgccgctgagcaagctgcagcaaag
ttggctttgattgccatgatgaaagcgttgccacaggaatctcgcaaacccaagaagact
cggtcggcaaaaaagaaagcagcaaaaaaagaaatcaccgaagagcagttcaatcttaag
ctgaagggctaa

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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