KEGG   Pseudoalteromonas nigrifaciens: PNIG_a2723
Entry
PNIG_a2723        CDS       T05271                                 
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
png  Pseudoalteromonas nigrifaciens
Brite
KEGG Orthology (KO) [BR:png00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:png03032]
    PNIG_a2723 (hupB)
   03036 Chromosome and associated proteins [BR:png03036]
    PNIG_a2723 (hupB)
   03400 DNA repair and recombination proteins [BR:png03400]
    PNIG_a2723 (hupB)
DNA replication proteins [BR:png03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PNIG_a2723 (hupB)
Chromosome and associated proteins [BR:png03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    PNIG_a2723 (hupB)
DNA repair and recombination proteins [BR:png03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      PNIG_a2723 (hupB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 HU-DNA_bdg Arteri_nsp7a
Other DBs
NCBI-ProteinID: ASM54709
UniProt: A0A379H8S5
Position
I:complement(2476693..2476965)
AA seq 90 aa
MNKSQLIDQIAADADISKAAAGRALDSFIESVTGALKEGDSVALVGFGTFSVRDRAARSG
RNPQTGETIQIAAATIPAFKAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataaatctcaattaatcgatcaaatcgcagctgatgctgacatttctaaagcggct
gcaggtcgtgcactagattcatttatcgaatcagttactggcgcacttaaagaaggcgac
tcagttgcacttgttggttttggtactttttcagttcgtgaccgtgctgcacgttcaggc
cgtaatccacaaactggcgaaacaattcaaattgctgctgcaactatccctgcatttaaa
gcaggtaaagcactaaaagacgcagtaaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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