KEGG   Polynucleobacter asymbioticus: Pnuc_0390
Entry
Pnuc_0390         CDS       T00502                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
pnu  Polynucleobacter asymbioticus
Brite
KEGG Orthology (KO) [BR:pnu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pnu03009]
    Pnuc_0390
Enzymes [BR:pnu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     Pnuc_0390
Ribosome biogenesis [BR:pnu03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Pnuc_0390
SSDB
Motif
Pfam: PseudoU_synth_2 S4 Cupin_3
Other DBs
NCBI-ProteinID: ABP33610
UniProt: A4SVU6
Position
383238..384257
AA seq 339 aa
MKPSPIPKPSKTQSAPPAVHLQTIGPEEAGQRLDNYLLRWAKGVPKSHVYRIIRSGEVRV
NKKRAEPTTRLVEGDVVRVPPVRIAEPAQMAAVNTAQTKSRAQGYSDKMPILFEDEALLI
VNKPAGLAVHGGSGIALGVIETLRITRPELKFLELVHRLDRDTSGVLLLAKKRSALVELH
RQIREGQTDKRYYLLAHGEIEQGAQVMQLKYPLHKYLLANGERRVRVDPDGLPSHTALRV
TQVFKREGAAITLAEAQLKTGRTHQIRVHLLKLGHAILGDDKYGFEDQDKLLKSKRLYLH
AHLAGFTHPRTGEKMRIESPLPSEFAAMMKTFDVADVSE
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgaaacccagtcccatacccaagccttccaagacccaatctgccccaccggcagtccat
ttgcagacaatcggccctgaagaggctggccagcgtttggataattacttgctacgttgg
gccaaaggggtccccaaaagtcacgtttatcggattattcgctcaggtgaagtccgagta
aataagaagcgagctgagcccactacccggctggttgagggggatgtggttagagttcct
cctgtcagaattgctgagcctgcccagatggcggctgttaataccgcccagaccaagtcc
cgtgcgcagggctattccgacaaaatgcccatcctgtttgaagatgaggcactcctgatt
gtgaataaaccagcgggattggcggttcatggcggctcaggaattgctttgggggtgatt
gaaacccttcgaattactcgtcccgagttgaagtttttggaattagtgcatcgcttggat
cgcgatacctccggagttctactcttagctaagaaacggagtgctctcgttgaattgcat
cgccagattcgtgaaggccaaacagacaagcgctactacttgcttgcacatggtgaaatc
gagcagggcgcgcaagtgatgcaactgaaatatccgcttcataagtatttactggcaaat
ggtgagcggcgcgttcgtgttgatccggacggattgcctagtcacaccgcattacgagtg
actcaagtattcaagcgggaaggtgctgcgatcacattggctgaggctcagttaaaaaca
gggcgcacccatcagattcgagtacatcttctaaagctaggacacgctattttgggtgat
gataagtatggatttgaagatcaagataagttactcaaatccaagcgactctatctgcat
gcccatctggccggctttacgcacccacgtaccggtgaaaaaatgcgcattgaatcacct
ttgccatcagaatttgcagccatgatgaaaacctttgatgttgctgatgtaagtgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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