KEGG   Polynucleobacter asymbioticus: Pnuc_1805
Entry
Pnuc_1805         CDS       T00502                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
pnu  Polynucleobacter asymbioticus
Pathway
pnu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pnu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Pnuc_1805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pnu03019]
    Pnuc_1805
   03110 Chaperones and folding catalysts [BR:pnu03110]
    Pnuc_1805
   03029 Mitochondrial biogenesis [BR:pnu03029]
    Pnuc_1805
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pnu04147]
    Pnuc_1805
Enzymes [BR:pnu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     Pnuc_1805
Messenger RNA biogenesis [BR:pnu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Pnuc_1805
Chaperones and folding catalysts [BR:pnu03110]
 Heat shock proteins
  HSP60 / Chaperonin
   Pnuc_1805
Mitochondrial biogenesis [BR:pnu03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    Pnuc_1805
Exosome [BR:pnu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Pnuc_1805
  Exosomal proteins of other body fluids (saliva and urine)
   Pnuc_1805
  Exosomal proteins of breast cancer cells
   Pnuc_1805
  Exosomal proteins of colorectal cancer cells
   Pnuc_1805
  Exosomal proteins of bladder cancer cells
   Pnuc_1805
SSDB
Motif
Pfam: Cpn60_TCP1 MukE
Other DBs
NCBI-ProteinID: ABP35018
UniProt: A4SZV4
Position
complement(1883492..1885144)
AA seq 550 aa
MAAKDVVFGDSARTKMVEGVNILANAVKTTLGPKGRNVVIERSFGGPTITKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTADIAGDGTTTATVLAQSIVREGMKYVVSGHNPMDLKRGI
DKAVTAAIAELAKISKPCTTTKEIAQVGSISANSDHSIGQRIAEAMEKVGKEGVITVEDG
KSLEDELEVVEGMQFDRGYLSPYFINQPEKQVAVLESPYVLLFDKKIANIRDLLPVLEQV
AKSGRPLLIIAEDVEGEALATLVVNNIRGIIKTCAVKAPGFGDRRKAMLEDIAILTGGTV
IAEEIGLTLEKATLEHLGQAKRIEVGKENTIIIDGAGDAKAIEARVKNIRVQIEEATSDY
DKEKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVDDALHATRAAVEEGIVPGGGVALI
RAMQGIKGLKGDNADQDAGISIVLRAMQEPLRTIVSNAGEDAGVVVNAVQASTGNNGYNA
ATGEYGDLVAQGVIDPTKVTKTALVNAASVAGLLLTTDCAISEAPKDESGAGGMPDMGGM
GGMGGMGGMM
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggcagcaaaagacgttgtatttggagatagcgctcgcaccaagatggtggaaggcgta
aacattcttgctaatgcagttaaaacaactttaggaccaaaaggtcgcaatgttgtgatc
gagcgttcattcggcggccctaccatcactaaagacggtgtgtccgttgcaaaagaaatc
gaacttaaagacaagctgcaaaacatgggcgcgcagatggttaaggaagttgcttccaaa
actgctgacatcgctggcgacggcacaactaccgctacggttttggctcagtctatcgtt
cgtgaaggcatgaagtatgtagtttcaggccataacccaatggacttgaagcgtggtatc
gataaagctgttacagctgcaatcgcagagctcgcaaaaattagcaagccttgcacgacc
actaaagaaattgctcaggtaggttctatctctgcaaacagcgatcatagtattggtcag
cgcattgcagaagcaatggaaaaagtaggtaaagaaggcgttatcactgttgaagatggt
aagtctttagaggacgagctcgaagtcgttgaaggtatgcagtttgatcgtggctacctt
tctccatacttcatcaatcaaccagaaaagcaagttgctgtattggaaagcccatacgtt
ctcttgtttgataagaagattgctaacatccgtgatttgttaccagtactcgagcaagta
gcaaagtctggccgtcctttgttgatcattgctgaagatgttgaaggcgaagccttagca
actttggttgtaaacaacattcgcggcattatcaagacttgtgctgttaaggctccagga
tttggtgatcgtcgtaaagccatgttggaagacatcgctatcttgactggcggaactgtt
atcgctgaagaaatcggcctgacactcgagaaagcaactcttgagcacttgggtcaagca
aagcgtatcgaagtaggcaaagaaaataccatcatcattgatggtgctggcgatgctaaa
gcgattgaagctcgcgtgaagaacattcgtgttcagatcgaagaagcgactagcgattac
gacaaggaaaaattgcaagagcgtgtagctaaattagctggcggtgttgcggtgattcgt
gttggcgctgctactgaagttgaaatgaaagagaagaaagctcgcgttgatgatgcattg
catgcaactcgtgctgccgtggaagaaggtattgttcctggcggtggcgtagcattgatt
cgtgctatgcaaggtatcaagggattgaaaggcgataacgctgatcaagacgctggtatc
agcatcgtattgcgcgctatgcaagagccattacgtactatcgttagcaacgccggtgaa
gatgctggtgtagttgttaatgcggtacaagcaagcacaggcaataacggttacaacgct
gctactggtgagtatggcgacttggttgctcaaggtgttattgatcctactaaggtaaca
aaaactgcattggtaaatgctgcttctgttgctggcctcttgttgactactgactgcgca
atctccgaggcaccaaaagatgagtctggtgctggtggaatgcctgatatgggtggtatg
ggcggtatgggtggtatgggcggcatgatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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