KEGG   Polaribacter vadi: LPB03_00040
Entry
LPB03_00040       CDS       T04504                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pob  Polaribacter vadi
Pathway
pob00300  Lysine biosynthesis
pob00470  D-Amino acid metabolism
pob01100  Metabolic pathways
pob01110  Biosynthesis of secondary metabolites
pob01120  Microbial metabolism in diverse environments
pob01230  Biosynthesis of amino acids
Module
pob_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pob00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LPB03_00040
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LPB03_00040
Enzymes [BR:pob01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     LPB03_00040
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: AOW15950
UniProt: A0A1B8TP84
Position
complement(5826..6596)
AA seq 256 aa
MNLSFYKYQGTGNDFVMIDNRTKIFPKDEINKILQISDRHFGIGADGIILIENDDNFDFK
MIYFNADGSQTFCGNGARCAVAFAKYLNIIQQKTTFLAVDGKHFAEIKDDIISLQMINVD
DIKVSENSVFMHTGTQHHVEMVKELENYPVFDNGKKIRNSYDFPGSNVNFVQQLNDTTFR
VRTYEKGVEDETLACGTGVTAVAIAMHKTNKTKSNSISLPVEGGNLEVSFDENNGVYTNV
FLKGPAKFVFKGEINI
NT seq 771 nt   +upstreamnt  +downstreamnt
atgaatttatcgttttataaataccaaggaacaggaaatgatttcgttatgattgataac
agaacaaaaatctttccaaaagatgaaattaacaaaattttacaaatttctgacagacat
tttggcattggcgcagatggaattattttaattgaaaatgatgacaacttcgattttaaa
atgatttattttaatgctgatggtagccaaactttctgtggaaatggggcaagatgtgct
gttgctttcgcaaaatatttgaatattattcaacaaaaaacaacttttttagcggttgat
ggtaagcattttgctgaaattaaagatgacataatttcattacagatgataaatgttgat
gacattaaagtgagtgaaaactcggtttttatgcatacaggaactcaacatcatgtagaa
atggttaaggagttagaaaattatccagtttttgacaatggtaaaaaaattagaaattct
tacgattttcctggcagtaacgtaaattttgtacagcaattaaatgacactacttttaga
gtaagaacctacgaaaaaggggttgaagatgaaactttagcttgtggaactggtgttaca
gcagttgcaattgctatgcacaaaacgaataaaacaaaaagtaattccatttctttacct
gtagaaggtggaaatctagaagtttcttttgatgaaaataatggagtttatacaaacgta
tttttaaaagggcctgcaaaatttgtttttaaaggggaaattaatatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system