KEGG   Polaribacter vadi: LPB03_02315
Entry
LPB03_02315       CDS       T04504                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pob  Polaribacter vadi
Pathway
pob03030  DNA replication
pob03430  Mismatch repair
pob03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pob00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LPB03_02315
   03430 Mismatch repair
    LPB03_02315
   03440 Homologous recombination
    LPB03_02315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pob03032]
    LPB03_02315
   03400 DNA repair and recombination proteins [BR:pob03400]
    LPB03_02315
Enzymes [BR:pob01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LPB03_02315
DNA replication proteins [BR:pob03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LPB03_02315
DNA repair and recombination proteins [BR:pob03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LPB03_02315
SSDB
Motif
Pfam: RNase_T RNase_H_2 DEDDh_C Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AOW16371
UniProt: A0A1B8U2C0
Position
complement(510111..511190)
AA seq 359 aa
MYAILDIETTGGKFNEEGITEIAIHKFDGHEVVDTFISLINPEQPIQEFVVRLTGINNKM
LRNAPKFYEVAKRIVEITKDCIIVAHNSAFDYRILRTEFERLGFDFERNTLCTVELSQQL
ILDQPSYSLGKLTKALGIPITERHRANGDALATIQLFKLLLAKDTEKSIIQSSIKYFDRR
LEKEKLNNLINEIPNVLGIFYVHDTNGKVIFIGKGKNIKAEINNLFIKTTRRAVKIQERA
VSVSYNKTGNELFTRLKFYLELESISPKFNFRKTFKINEDNFNNDNFIIIEKGREIEENA
IILIENNVVISYGYTNLAFQEDNIEILKTVLTSIKENEIAKSIVKNYLNKSKVKKIVRF
NT seq 1080 nt   +upstreamnt  +downstreamnt
ttgtacgctattttagatattgaaactactggaggtaaatttaatgaagaaggaattacg
gaaattgctattcataaatttgatggacatgaggttgtagatacgtttatatcgcttata
aacccagaacaacctattcaagaatttgtggtaagacttactggcatcaacaataaaatg
ttgcgaaatgcacccaaattttatgaagttgctaaaagaattgtagaaattacaaaagat
tgcattattgtagcccataattctgcattcgattatagaattttaagaaccgaattcgaa
cggttaggattcgattttgagagaaatacgttgtgtactgtagaattaagtcagcaactt
attttagatcaaccttcttacagtttaggaaaacttacaaaagctttaggaataccaatt
acagaaaggcacagagcaaatggtgatgctttagcaaccatccaattatttaaattatta
ttggcaaaagataccgaaaaaagtattattcaaagttctattaaatattttgatagaaga
cttgaaaaagaaaagctgaacaatttgattaatgaaattccaaatgttttaggtattttt
tatgtgcatgacaccaatggaaaagttatttttattggaaaaggtaaaaatataaaagca
gagattaacaacttgtttattaaaactactagaagagctgttaaaattcaagaaagagct
gtatcagtttcttataataaaactggtaatgaattatttacacgtttaaaattttattta
gaattagaatccatttcgccaaaatttaattttagaaaaacttttaaaattaacgaagac
aattttaataacgataattttatcattattgaaaaaggaagagaaattgaagaaaacgct
atcattttaattgaaaataatgtagtaatcagttatggatatacaaatttagcatttcaa
gaagataatattgaaattctaaaaacggtgttaacatcaattaaagagaatgaaattgct
aaatcgattgtaaaaaattacttgaacaaaagtaaagtaaaaaaaatagtgcgtttttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system