KEGG   Polaribacter vadi: LPB03_09280
Entry
LPB03_09280       CDS       T04504                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
pob  Polaribacter vadi
Pathway
pob03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pob00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LPB03_09280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pob03400]
    LPB03_09280
Enzymes [BR:pob01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LPB03_09280
DNA repair and recombination proteins [BR:pob03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LPB03_09280
    RecFOR pathway proteins
     LPB03_09280
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 Mg_chelatase AAA_3 nSTAND3 AAA_14 AAA_16 ResIII TIP49 AAA_PrkA RNA_helicase AAA_18 NB-ARC AAA_33 Rad17 TsaE NTPase_1 AAA_28 AAA_24 Bac_DnaA NACHT AAA_11 AAA_17 bpMoxR
Other DBs
NCBI-ProteinID: AOW17646
UniProt: A0A1B8U3L8
Position
complement(2087153..2088175)
AA seq 340 aa
MNENLNPENTNLSNEDLDVEKKLRPLSFEDFAGQDQAIDNLKIFVEAANQRGEALDHTLF
HGPPGLGKTTLAHILANELQVGIKVTSGPVLDKPGDLAGLLTNLDERDVLFIDEIHRLSP
IVEEYLYSAMEDYKIDIMIESGPNARTVQINLEPFTLIGATTRSGLLTAPMRARFGISSR
LHYYTTELLTTIIQRSSHILGVPISMEAAIEIAGRSRGTPRIANALLRRVRDFAQIKGDG
NISIEIAKYALKALNVDAHGLDEMDNKILATIIDKFKGGPVGLSTIATAVSENTETIEEV
YEPFLIQQGFIMRTPRGREVTELAYTHLGRVKGRNQGELF
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgaacgaaaacttgaatcctgaaaatacgaatttatcaaacgaagatttagatgtagaa
aaaaaattacgtccactttcttttgaagattttgcaggtcaagatcaagctatagataat
ctaaaaatatttgttgaagcagctaatcaaagaggagaagctttagatcataccttattt
catggtcctcctggattagggaaaacaacgcttgcgcatattttagcaaacgaattacaa
gttggcattaaagtaacatcaggtccagttttagacaaaccaggagatcttgcaggatta
ttaacaaatcttgatgaaagagatgtgctatttatagatgaaattcatagattaagccca
attgtagaagagtatttatattctgcaatggaagattacaagattgatattatgattgaa
tctggtccaaatgccagaactgttcaaatcaatttagagccatttacattaattggtgca
actacaagatctggtttattaacagcaccaatgagagctcgttttggaattagcagtaga
ttacattattataccacagaattactaacaactattattcagagaagttcacatatatta
ggggttcctatttctatggaagctgctatagaaattgcaggtagaagtagaggaactcca
agaattgcaaacgctttattaagaagagtaagagattttgctcaaataaaaggcgatgga
aatattagtattgaaattgcaaaatatgctttaaaggctttaaatgttgatgctcatggt
ttagatgaaatggacaataaaattttagccaccattattgataaatttaaaggaggacca
gtaggtttaagtaccattgcaactgcagtatcagaaaatacagaaactatagaagaagta
tatgaaccttttttaattcagcaaggttttattatgagaactcctagaggaagagaagtt
acagaattagcttatacacatttaggaagagtaaaaggaagaaatcaaggagaacttttt
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (28)   
   Pfam (28)   
All databases (38)   

Download RDF
DBGET integrated database retrieval system