KEGG T03326: PODO

Paenibacillus odorifer: PODO_12525

Entry

PODO_12525        CDS       T03326

Name

(GenBank) threonine--tRNA ligase

K01868

threonyl-tRNA synthetase [EC:6.1.1.3]

Organism

pod Paenibacillus odorifer

Pathway

pod00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:pod00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    PODO_12525
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pod01007]
    PODO_12525
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pod03016]
    PODO_12525
Enzymes [BR:pod01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.3  threonine---tRNA ligase
     PODO_12525
Amino acid related enzymes [BR:pod01007]
Aminoacyl-tRNA synthetase
  Class II (C/G)
   PODO_12525
Transfer RNA biogenesis [BR:pod03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    PODO_12525
Prokaryotic type
    PODO_12525

SSDB

Motif

Pfam:

tRNA-synt_2b HGTP_anticodon tRNA_SAD TGS MgtE_N

Other DBs

NCBI-ProteinID:

AIQ74004

Position

complement(2855413..2857326)

AA seq 637 aa
MKIKVTLQDGTIREVLQGTTIKEAAGAISTSLKKNAVAGKIDGKSVDLNQAIEHDCRLDI
VTLDSKDGLEVYRHSTAHIMAQAIKRIYGDKAVQLGIGPVIEDGFYYDIDIEKPLSTDDL
AAIEQEMAKIIQENHQIVRRVVSRAEAIKLFEELNEPLKLELIHDLPADTVLTIYDQGEF
SDLCRGPHLPSTGLVKAFKLLNVAGAYWRGDSNNKMLQRIYGTAFPKKAQLEEHLLFLEE
AKKRDHRKLGKELELFMFSEEAPGMPFYLPKGMTIRTELENFARELQRQRDYDEVRTPLM
MNNRLWEQSGHWDHYKDNMYFTNVDETKFALKPMNCPGHMLIFKNNLHSYRELPIRISEF
GQVHRHEYSGALNGMMRVRTFCQDDAHLFVLPEQIEDEIRRVISLIDHIYQVFGFEYKIE
LSTRPADYMGSEELWDQAEQSLQNVLDNLGIEYRVNEGDGAFYGPKIDFHILDALKRSWQ
CGTIQLDWQMPEKFDLTYIGEDNLKHRPVVIHRAVYGSIDRFMGIITEHFAGAFPLWLAP
VHAKLLPVSENYVDYALQVKHQMEKAGIRVEVDIRNEKLGYKIREAQLEKAPYMLVLGEN
EKNSDTVSVRKRGEGDLGSKSIQDIIKQINEEIISKR

NT seq 1914 nt +upstreamnt +downstreamnt
atgaagatcaaggtaacactgcaagatggaacaattagagaggtactgcaaggaacaacg
attaaagaagcagcaggtgccataagtaccagtctgaaaaaaaatgctgtagctggaaaa
attgatggaaaatctgttgatctaaaccaagcgatcgaacatgattgccggctcgatatt
gttacgttggatagcaaagacggtcttgaggtttatagacacagtactgcacatatcatg
gcgcaggccataaaacgtatatatggagataaagctgtccagctaggcataggtcctgtt
atcgaagacggcttctattatgacattgatattgagaaacctctatccactgatgatctt
gctgcaatcgaacaagaaatggcgaaaatcatccaagagaatcaccagattgtccgccgt
gtggtgagccgcgcagaggccattaaactttttgaagagttgaatgagcctttaaagctg
gagcttattcatgatctgccggcagacacagtattaactatttatgatcaaggtgaattc
tccgatctttgccgtggaccacatcttccctcaactggcttggtcaaagcctttaagctg
ttgaatgtagcgggtgcctactggcgtggagattccaataacaaaatgctgcaacgtatt
tatggaactgcctttcctaaaaaagcgcagttagaggaacatttactgtttcttgaagaa
gctaaaaaacgtgaccaccgtaagctcggcaaagaacttgagttgttcatgttctctgaa
gaagcgccaggcatgcccttctatcttcccaagggaatgacaatccgtacagagcttgag
aactttgcccgggaattacaaagacagagagattacgatgaagttcgtacaccgctgatg
atgaacaatcggctttgggagcagtcggggcactgggatcactacaaggacaatatgtat
ttcacaaatgtagatgaaacaaaatttgcccttaagccgatgaactgccctgggcatatg
ctaattttcaaaaacaatctgcattcctaccgggaactgcctatccgtatctcggaattc
ggtcaagtgcatcgccatgaatattctggagcacttaacgggatgatgagagtccgcact
ttctgccaggatgatgctcacctcttcgttttgccagagcaaatcgaggatgaaataaga
cgggtaatctcactgattgaccatatttatcaagtgttcggctttgagtataagattgaa
ttatctactcggccggcagattatatggggtctgaagagttatgggatcaggctgaacaa
tctttacaaaatgtattagacaatctcgggatcgaatatcgtgtgaatgaaggggatggc
gcgttctatggacctaagattgatttccatatcctagatgcgctaaaacgaagctggcaa
tgtggaacaatccaactagattggcaaatgccagagaaattcgatcttacttacatcggg
gaagataatcttaaacatcgcccggtcgtaatccatcgcgctgtgtatgggtcgatcgat
cgttttatggggatcattactgagcatttcgctggggctttcccactgtggctcgcacct
gttcatgcgaagttattgccagtctctgagaactatgttgactatgcactgcaagtgaag
catcaaatggagaaggctggcattcgtgtcgaagtagatattcgaaatgagaagttaggc
tacaaaattcgtgaagctcagcttgaaaaagcaccttacatgctcgtactgggggagaac
gaaaaaaattccgacactgtctctgtaagaaaacgtggtgaaggtgatcttggttcgaag
agtatccaagacatcattaaacagattaatgaagagattattagtaagagataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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