KEGG   Polynucleobacter paneuropaeus: DPM16_02235
Entry
DPM16_02235       CDS       T05507                                 
Name
(GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
  KO
K00783  23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Organism
poh  Polynucleobacter paneuropaeus
Brite
KEGG Orthology (KO) [BR:poh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:poh03009]
    DPM16_02235
Enzymes [BR:poh01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.177  23S rRNA (pseudouridine1915-N3)-methyltransferase
     DPM16_02235
Ribosome biogenesis [BR:poh03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    DPM16_02235
SSDB
Motif
Pfam: SPOUT_MTase Colicin_Pyocin
Other DBs
NCBI-ProteinID: AWW44149
UniProt: A0A9Q7FZU3
Position
complement(421359..421802)
AA seq 147 aa
MRLTIVSVGHKMPDWVTTASHDYIKRMPTDCAIDVKEIKPDLTPAKEAIKILTAIPKGSQ
IIALDERGKDQTTQQLSKQLASWRQDGLDITFLIGGADGLDPSLKEKAHAMWRLSSLTLP
HAMARLILIEQLYRAWTILQGHPYHRE
NT seq 444 nt   +upstreamnt  +downstreamnt
atgcgactgacgattgtttccgtgggacataagatgccggattgggtaacaacggcaagc
catgactacattaagcgtatgccaacagactgcgcgattgatgttaaagaaattaagccc
gacctcacaccggctaaagaggcaatcaagatcttgacagccattccaaaaggatcgcaa
atcattgccttagatgagcgcggcaaagatcaaactacccaacagttatcaaagcagctc
gcaagctggcgccaagatgggctcgacatcaccttcttgattggtggcgccgacggtcta
gaccctagcctcaaagaaaaagcgcatgcaatgtggcgactttctagtctgactttacct
cacgctatggctagacttatcttaatcgagcaactctaccgagcctggactattttgcaa
ggccacccgtatcatcgagagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system