KEGG T05507: DPM16

Polynucleobacter paneuropaeus: DPM16_07425

Entry

DPM16_07425       CDS       T05507

Symbol

rsmD

Name

(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD

K08316

16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]

Organism

poh Polynucleobacter paneuropaeus

Brite

KEGG Orthology (KO) [BR:poh00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:poh03009]
    DPM16_07425 (rsmD)
Enzymes [BR:poh01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.171  16S rRNA (guanine966-N2)-methyltransferase
     DPM16_07425 (rsmD)
Ribosome biogenesis [BR:poh03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    DPM16_07425 (rsmD)

SSDB

Motif

Pfam:

Cons_hypoth95 MTS Methyltransf_31 Methyltransf_25 RsmJ N6-adenineMlase Methyltransf_24 MipZ

Other DBs

NCBI-ProteinID:

AWW45063

Position

complement(1473928..1474533)

AA seq 201 aa
MSRQQTELPKKVRIIGGVWRSRLLDVIDLPDLRPTTDRIRETLFNWLGQDLARLRCLDLF
AGTGVLGFEAASRGAGNVQLVEKNKKAYLGLTHNFAALQSSPVTGVVQIAQQDGLEFLKR
QSAKSFDLIFIDPPFQDQALLNQALSESSRVCDPSSGGCIYVEFPSSRSLDEIKSLLPAW
DCGKYLEAGQVKACLFVGRSD

NT seq 606 nt +upstreamnt +downstreamnt
atgtctaggcaacaaactgaactcccaaaaaaggttcgtattatcggcggagtttggcgt
agtcgtttgctcgatgtgattgacttgcctgatctcaggccaacaacggatcgtattcga
gaaacactttttaactggctgggacaagatcttgcaagattgcgttgtctcgatctgttt
gcaggaacaggtgttctaggatttgaggcggcttctcggggtgcgggaaacgttcagctt
gtagagaaaaataaaaaagcgtatttgggtttaactcataactttgctgccctccaatct
tcaccggtaactggagtagttcagatcgcccagcaagatggccttgagtttttaaaacgc
caatctgcgaagtcctttgatctcatctttatcgatcccccttttcaggatcaggcttta
ttgaatcaggctctgagcgagtcctctcgggtctgcgatccatcgtccgggggctgtatt
tatgtagaatttccctcaagccgatctcttgatgaaatcaaaagcctactaccggcttgg
gattgtggaaagtacttagaggctggacaggtaaaagcctgtctatttgtgggcagaagc
gactaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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