KEGG   Pseudomonas orientalis: BOP93_25640
Entry
BOP93_25640       CDS       T05323                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
poi  Pseudomonas orientalis
Pathway
poi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:poi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BOP93_25640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:poi03021]
    BOP93_25640
   03400 DNA repair and recombination proteins [BR:poi03400]
    BOP93_25640
Enzymes [BR:poi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BOP93_25640
Transcription machinery [BR:poi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BOP93_25640
DNA repair and recombination proteins [BR:poi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BOP93_25640
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AUZ48840
UniProt: A0A0R3A8E0
Position
5818224..5818487
AA seq 87 aa
MARVTVEDCLEHVDNRFELVMLSTKRARQLATGGKEPLVQWENDKPTVVALREIAEGLMS
YEFIANAEIVEDEPLFAAFEDESNEAV
NT seq 264 nt   +upstreamnt  +downstreamnt
atggcccgcgtaaccgttgaagactgcctagaacacgtggataaccgctttgagctggtc
atgctctctaccaagcgtgcccgtcaactggccactggcggcaaagagcccctggtccag
tgggaaaacgacaagcctaccgttgtggccctgcgcgaaatcgccgaaggcctgatgagc
tacgagttcatcgccaacgctgaaatcgttgaagacgaaccgctgtttgcagcgttcgag
gacgagtccaacgaggccgtctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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