KEGG   Polaromonas sp. JS666: Bpro_0003
Entry
Bpro_0003         CDS       T00343                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
pol  Polaromonas sp. JS666
Brite
KEGG Orthology (KO) [BR:pol00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pol03032]
    Bpro_0003
   03400 DNA repair and recombination proteins [BR:pol03400]
    Bpro_0003
Enzymes [BR:pol01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Bpro_0003
DNA replication proteins [BR:pol03032]
 Prokaryotic type
  DNA Topoisomerases
   Bpro_0003
DNA repair and recombination proteins [BR:pol03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Bpro_0003
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: ABE41970
UniProt: Q12HM2
Position
2944..5568
AA seq 874 aa
MTEENNVNGADQVHVTDGTAGEESSNFQPKIDTNQAGASEAYGEGSIQILEGLEAVRKRP
GMYIGDTSDGTGLHHLVFEVVDNSIDEALAGHCDDIVVTIHTDNSISVTDNGRGIPTGIK
MDDKHEPKRSAAEIALTELHAGGKFNQNSYKVSGGLHGVGVSCVNALSKMLRLTIRRDGK
VHVMEFSRGFVQNRIIEQINGVDVSPMKVMDHTDKRGTEVHFLPDTEIFKENNDFHYEIL
SKRLRELSFLNNGVRIRLKDERSGKEDDFAGAGGVKGFVEFINKGKTVLHPNVFAAMGDR
QSDQGTNIGVEVAMQWNSGYSEQVLCFTNNIPQRDGGTHLTGLRAAMTRVINKYIDDSEL
AKKAKVEVTGDDMREGLCCVLSVKVPEPKFSSQTKDKLVSSEVRGPVEDIVSRLLHDYLQ
ERPNDAKIIVGKIIEAARAREAARKARDMTRRKGVLDGMGLPGKLADCQEKDPAMCEIYL
VEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKARYEKLLTSNEILTLITALGTGIGKAG
GIGGTPGTDDFNVAKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQP
PLYKVKAGKEEQYLKDTAALDGFLLRIALKDASVQTGADASTVLTGDTLAELARKHQLAE
SVIARLRGFMDAEALRAIADGVSLNLDTVADAEASAVTLQVKLRELNTTGAPADVAGEFD
TRTDKPILRISRRHHGNVKSSVITQDFVHGADYATLADAAATFRGLISEGAKVMRGEGER
QKEEKVSDFRQAMAWLIGQAENATARQRYKGLGEMNPAQLWETTMDPQVRRLLRVQIDDA
IEADHVFTMLMGDEVEPRREFIEQNALRAANIDV
NT seq 2625 nt   +upstreamnt  +downstreamnt
atgactgaagaaaacaatgtgaacggggccgatcaggtgcacgtaactgacggtactgcg
ggcgaggaaagctccaatttccagcccaaaatcgacaccaaccaggccggcgcttcagaa
gcctacggcgaaggctcgatccagatcctggaaggcctggaagccgtgcgcaagcgcccc
ggcatgtacattggcgacacttcagacggcaccggcttgcaccacctggtgttcgaggtg
gtcgacaactcgattgacgaagcactggccggccactgcgacgacatcgtcgtcaccatc
cacaccgacaactccatcagcgtgaccgacaacggccgcggcattccgaccggcatcaag
atggacgataagcatgagcccaaacgctcggccgccgagattgccctgaccgagctgcat
gccggcggcaagttcaaccagaacagctacaaggtctcgggtggcctgcacggcgtgggc
gtgagttgcgtgaatgcgctgtcaaaaatgctgcgcctcaccattcgccgcgacggcaag
gtgcatgtcatggagttctcgcgcggctttgttcaaaaccgcatcatcgagcagatcaac
ggcgtggatgtctcgccgatgaaggtgatggaccacaccgacaagcgcggcaccgaagtc
cactttttgcccgacactgaaatcttcaaagagaacaacgatttccattacgagatcttg
agcaagcgcctgcgcgagctgagttttttgaacaacggcgtgcgcattcgcctgaaagac
gagcgcagcggcaaggaagacgactttgccggcgccggcggcgtgaaaggctttgttgaa
ttcatcaacaagggcaagacggtgctgcaccccaacgtgtttgccgccatgggcgaccgc
cagagcgaccagggcaccaacatcggcgtggaagtcgccatgcagtggaacagcggctac
agcgaacaggtgctgtgtttcaccaacaacattccgcagcgcgacggcggcacccacctg
accggcctgcgcgccgcgatgacgcgcgtcatcaacaaatacatcgacgacagcgagctg
gccaaaaaagccaaggtggaagtcacgggcgacgacatgcgcgaaggcctgtgctgcgtg
ctgagcgtgaaggtgcccgagcccaagttctccagccagaccaaggacaagctggtgagc
agcgaggtgcgcggcccggtcgaagacattgtgagccgcctgttgcacgactacctgcag
gagcgcccgaacgacgccaagatcatcgtcggcaagatcattgaggccgcccgcgctcgc
gaagccgcgcgcaaggcgcgcgacatgacgcgccgcaagggcgtgctcgacggcatgggc
ctgcccggcaagctggccgactgccaggaaaaagaccccgccatgtgcgagatctacctg
gtcgagggtgactccgccggtggctccgccaagcagggccgcgaccgtaaattccaggcc
atcctgccgctgcgcggcaagatcctgaacgttgaaaaagcccgctacgaaaagctgctg
accagcaacgagattttgacgctgatcaccgcgctgggcaccggcatcggcaaggccggc
ggcattggcggcacgcccggcactgacgacttcaacgttgccaagctgcgctaccaccgc
atcatcatcatgaccgacgccgacgtggacggcgcgcacatccgcacgctgttgctgacc
ttcttttaccgccagatgcccgagctggtcgagcgcggccacatctacatcgcgcagcca
ccgctgtacaaggtcaaggccggcaaggaagagcagtacctcaaggacaccgccgcactg
gacggctttttgctgcgcattgcgctcaaggatgcgagcgtgcagaccggcgccgacgca
agcaccgtgcttaccggcgacacgctggccgagctggcccgcaagcaccagctggccgag
tcagtgattgcccgcctgcgcggcttcatggacgcggaagccctgcgcgccattgccgac
ggcgtgagcctgaacctggacaccgtggccgatgcggaagcctccgccgtgacgctgcag
gtcaagctgcgcgaactgaacaccacgggcgcgccggccgacgtggccggcgagtttgac
acccgcaccgacaaacccattctgcgcatcagccgccgccaccacggcaacgtgaaaagc
agcgtgatcacgcaggactttgtgcacggcgccgactacgccaccctggccgatgccgcc
gccaccttccgcggcctcatcagcgaaggcgccaaggtcatgcgcggcgaaggcgagcgc
cagaaggaagaaaaagtcagcgacttccgccaggccatggcctggctgatcggccaggcc
gaaaacgccaccgcccgtcagcgctacaaaggcctgggcgagatgaacccggcccagcta
tgggagacgacgatggacccacaggtgcgccgtttgctacgcgtgcagattgacgacgcc
attgaagccgaccatgtgttcaccatgctgatgggtgatgaggtcgagccgcgtcgggag
tttattgagcagaatgcgttgcgggcggcgaatattgatgtctaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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