KEGG   Polaromonas sp. JS666: Bpro_1070
Entry
Bpro_1070         CDS       T00343                                 
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
pol  Polaromonas sp. JS666
Pathway
pol00300  Lysine biosynthesis
pol00550  Peptidoglycan biosynthesis
pol01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pol00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Bpro_1070
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Bpro_1070
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pol01011]
    Bpro_1070
Enzymes [BR:pol01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     Bpro_1070
Peptidoglycan biosynthesis and degradation proteins [BR:pol01011]
 Precursor biosynthesis
  Amino acid ligase
   Bpro_1070
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase YqeC LpxK
Other DBs
NCBI-ProteinID: ABE43022
UniProt: Q12EM0
Position
1100565..1102070
AA seq 501 aa
MTTQLHTPEQAARWLRERVTGSLRTDSRMVGGGDGFIAWPGAATDGRKYLGDALASGARA
CLVELQGFEPRGPDDERVAAYAGLKAATGPIAAAYFDEPSRHLQVAAVTGTNGKTSTTWW
LAQALGRLGRKCGVVGTLGIGAPGAVVFTGLTTPDPVLLQQQMRRFVDEGFATCALEASS
IGLVERRLDATTIQVAIFTNFTQDHLDYHPSMQDYWEAKKMLFSWPGLKAAVINVDDGKG
LELSASLAGSDLDVWTLSCTGPARIHAQKIHHGVNGVSFDVVEGAEQHRVSSKLVGQYNV
YNLLGVIAALRAMGIPLVDAVAACADLLPVPGRMDTLAEEGLPLVVIDYAHTPDALEKVL
TALQPVARSRGGQLWCVFGCGGDRDAGKRPLMAAVAEKNADRVVVTSDNPRSENPLAIID
QVLRGLNHRDAVHVQADRAMAITHALSLAQAHDVVLLAGKGHESYQEVQGVKLPFSDRTQ
AQAALALNAARVARQAGGGSA
NT seq 1506 nt   +upstreamnt  +downstreamnt
ttgacaacccagctccatacccccgagcaggcggcccgctggttgcgtgagcgcgtgacc
ggcagcctgcggacggacagccgcatggtgggcggcggtgacggattcattgcgtggcct
ggcgccgcgacggacggccggaagtatctcggtgatgcactggcttcgggcgcccgcgcc
tgcctggtggagttgcagggttttgagccccgcggcccggatgacgaaagggtggccgct
tacgcaggactcaaggcggcaaccggccccatcgccgctgcctattttgatgagccaagc
cggcatttgcaggtcgcggccgtcaccggcaccaatggcaagacatcgacaacatggtgg
ctggcccaggcgctgggcaggctggggcgcaaatgcggtgtcgtgggaaccctgggcatc
ggggcgcccggtgcggtggttttcacggggttgaccacccctgatcctgtgctgctccag
cagcaaatgcgccgttttgtggatgagggcttcgccacctgcgccctggaggcttcctcg
atagggctggtggagcggcggctggacgccaccaccatacaggtcgcgatcttcaccaac
ttcacgcaggaccatctcgactaccacccgtccatgcaggactattgggaggccaagaaa
atgctgttcagctggccaggcctgaaggcagcagtcatcaatgtggacgatggcaaaggc
cttgagctgagcgcgtcactggccggctcggacctggatgtctggacattgtcctgcaca
gggccggcccgaattcatgcacaaaaaattcaccacggcgtgaatggcgtgagttttgat
gttgtcgaaggcgcggagcagcaccgagtttccagcaagctggtcggccagtacaacgtg
tacaacctgctgggcgtcatcgcggccctgcgtgccatgggcataccgctggtcgatgcc
gtggctgcttgcgccgacctgctgccggtgccggggcgcatggacacgctggcggaagaa
ggcctgcccctggtcgtcatcgattacgcgcacacgcctgacgccctggaaaaagtactc
acagcgcttcagccggtcgcgcgcagccgcggtggccagctctggtgcgtctttggctgt
ggcggagaccgcgatgccggcaaacgcccgctgatggcagcggtggcggaaaaaaatgcc
gaccgggtggtggtcaccagcgacaacccgcgcagtgagaatccgctggccatcatcgac
caggtgctgagggggttgaatcaccgcgatgccgtgcacgtgcaggcagaccgggccatg
gcgattacgcatgcgctgagtttggcgcaagcccatgatgtggtgctgctggcgggcaag
gggcatgaaagttatcaagaggtccagggcgtgaagcttcctttttccgacaggacgcag
gcgcaagccgctctcgccctgaatgcggcgcgcgtggcacgccaggccgggggaggctcc
gcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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