KEGG   Polaribacter sp. MED152: MED152_12139
Entry
MED152_12139      CDS       T02533                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
pom  Polaribacter sp. MED152
Brite
KEGG Orthology (KO) [BR:pom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pom03032]
    MED152_12139 (gyrB)
   03400 DNA repair and recombination proteins [BR:pom03400]
    MED152_12139 (gyrB)
Enzymes [BR:pom01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     MED152_12139 (gyrB)
DNA replication proteins [BR:pom03032]
 Prokaryotic type
  DNA Topoisomerases
   MED152_12139 (gyrB)
DNA repair and recombination proteins [BR:pom03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MED152_12139 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 GyrB_hook Toprim_4
Other DBs
NCBI-ProteinID: EAQ40784
UniProt: A2U3J3
Position
complement(2682966..2684903)
AA seq 645 aa
MSEEKKHSYDASSIQALEGMEHVRMRPSMYIGDVGIRGLHHLVYEVVDNSIDEAMGGYCD
TIEVTINEDNSITTKDNGRGIPVGLHKKEGVSALQVVMTKIGAGGKFDKDSYKVSGGLHG
VGVSCVNALSDHLTATVHKEGKIWQQEYERGKTLYPVKTIGDTDFTGTIVTFLPDKSIFT
QSTEYNYETLATRMRELAYLNKGITITLTDKRNKDDEGNFISETFHSNKGLPEFIEYLDS
TREQLIANVISMEGEKNGIPVEVAMVYNTSYAENLHSYVNNINTHEGGTHLSGFRRGLTG
TLKKYADESGLLKNVKFDIAGDDFREGLTAIVSVKVAEPQFEGQTKTKLGNREVTSAVSQ
AVSEMLTDYLEENPNDAKTIVQKVILAATARHAARKARDMVQRKSVMSIGGLPGKLSDCS
ETDPAQCEIFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMQHKVFENEEIKNMF
TALGVSIGTEEDPRALNLSKIRYHKVVIMCDADVDGSHIATLILTFFFRYMKEMVEQGYI
YIATPPLYLVKKGQKRQYAWDDDQRDLIAQQMGGSVTIQRYKGLGEMNAEQLWDTTMNPE
FRTLRKVVIDSPTEADRVFSMLMGDEVPPRRDFIERNAKYANIDV
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgagcgaagaaaaaaaacatagttatgatgcgtccagtattcaggcactagaaggtatg
gagcatgttagaatgcgcccttctatgtatattggagatgttggtattagaggtttacat
catttagtttatgaagttgtggataactctattgatgaagcaatgggtggttattgtgat
actatagaggttacaattaacgaagataattctattactaccaaagataatggacgtgga
attcctgttggtttacataaaaaagaaggcgtttctgcattacaagttgtaatgacaaaa
attggtgctggtggtaaattcgataaagattcttataaggtttctggaggtttacatggt
gttggtgtttcttgtgttaatgcattatcagatcacttaacagctacagtacataaagaa
ggtaaaatttggcagcaagagtatgaacgaggaaaaactttatatcctgttaaaactatt
ggagacacagattttacaggtacaattgttacttttttaccagacaaatctatatttaca
caaagtacagagtacaattacgagactcttgctacaagaatgcgtgaattagcgtattta
aataaaggaataacaatcaccttaactgataaaagaaataaagatgatgaaggaaacttt
atctcagaaacttttcattcaaacaaaggtttaccagagtttattgagtatttagattct
actcgtgagcaattaattgcaaacgtaatttctatggaaggtgagaaaaacggaattcct
gtagaagttgctatggtttacaacacttcatacgcagaaaatttacattcttacgtaaac
aacattaatacacatgaaggtggtactcacctatccggttttagacgtggtttaacagga
actttaaagaaatatgcagacgaatcaggtttacttaaaaatgtaaaatttgatattgct
ggtgatgattttagagaaggtttaactgcaattgtttctgtaaaagtagcagaaccacaa
tttgaaggacaaacaaaaactaaattaggaaatagagaagtaacttctgcagtatctcag
gctgtatctgaaatgcttacagattatttagaagaaaatcctaatgatgcaaaaaccatt
gtacaaaaagtaattttagcagccactgcaagacatgccgctagaaaagcaagagacatg
gtgcaacgtaaaagtgtgatgtctattggtggtttacctggtaaattatctgactgttca
gaaactgatcctgctcaatgcgaaattttcttagttgagggagattctgcaggtggaaca
gctaagcaaggtagagatagaaactttcaggccatacttccacttcgtggtaaaatcttg
aatgtagaaaaagcaatgcaacataaagtttttgaaaacgaagaaatcaaaaacatgttt
acagctttaggggtttctattggtacagaagaagatccaagagcgctaaacttatcaaaa
ataagataccataaagtagttattatgtgtgatgccgatgttgatggttctcacattgct
actttaattttaacattcttctttagatacatgaaagaaatggttgagcaaggctacatt
tatatcgctactcctccattatatctagtaaaaaaaggtcaaaagagacaatatgcctgg
gatgatgatcaacgagatttaattgcccaacaaatgggtggttctgtaactatacaacgt
tacaagggtcttggagagatgaatgcagagcaattatgggatactactatgaatcctgaa
tttagaactttaagaaaggtagttattgatagcccaacagaagcagacagggtattttct
atgcttatgggtgatgaagtaccaccaagaagagactttatagaaagaaatgcaaaatat
gccaatatagacgtttaa

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