KEGG   Pongo abelii (Sumatran orangutan): 100172112
Entry
100172112         CDS       T01416                                 
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
pon  Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:pon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pon03016]
    100172112 (TRUB1)
Enzymes [BR:pon01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     100172112 (TRUB1)
Transfer RNA biogenesis [BR:pon03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    100172112 (TRUB1)
 Prokaryotic type
    100172112 (TRUB1)
SSDB
Motif
Pfam: TruB_N
Other DBs
NCBI-GeneID: 100172112
NCBI-ProteinID: NP_001125219
Ensembl: ENSPPYG00000002676
UniProt: Q5RCS1
Position
10:113437441..113476987
AA seq 169 aa
MAASEAAVVSSSSLKTDTSPVLETAGTVSAMAATPSARAAAAVVAAAARTGSEARVSKAA
LATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTL
DSAARGVLVVGIGSGTKMLTSMLSGSKRYTAIGELGKATDTLDSTGKIK
NT seq 510 nt   +upstreamnt  +downstreamnt
atggccgcttctgaggcggcggtggtgtcttcgtcgtctttgaaaacagacacatcccct
gtccttgaaactgcaggaacggtctcagcaatggctgcgaccccgtcagcaagggctgca
gccgcggtggttgcggccgcggccaggaccggatctgaagccagggtctccaaggccgct
ttggctaccaagctgctgtccttgagcggcgtgttcgccgtgcacaagcccaaagggccc
acttcagccgagctgctgaatcggttgaaggagaagctgctggcagaagctggaatgcct
tctccagaatggaccaagaggaaaaagcagactttgaaaattgggcatggagggactcta
gacagcgcagcccgaggagttctggttgttggaattggaagtggaacaaaaatgttgacc
agtatgttgtcagggtccaagagatatactgccattggagaactggggaaagctactgat
acactagattctacggggaagataaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (20)   

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